Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2297 |
Symbol | |
ID | 3774580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2367528 |
End bp | 2368721 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800745 |
Product | transaldolase/EF-hand domain-containing protein |
Protein accession | YP_401314 |
Protein GI | 81301106 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.66755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCGA ATTTACTCGA ACAACTCCGC GGAATGACGG TGGTTGTCGC AGATACCGGC GACATTCAGT CGATCGCGAC GTTCACCCCT CGCGATGCCA CCACCAACCC TTCTCTGATC ACAGCCGCGG CGCAAATGCC GCAGTATCAA AGCATTATTG ATGACACGCT CCGCCAAGTT CGGACTGAGC TAGGCGCAGA AGCCCCTGTA GAAGCGATCG TGGCTGAAGC CATCGATGAA CTGTTTGTCG CTTTTGGCTT GCGCATTCTC GAAATTGTGC CAGGGCGCGT TTCCACAGAA GTTGATGCTC GGCTCTCCTA CGACACCGAA GCCACGATCG CTAAAGCCCG TAAGCTGATT GGGCTGTACG AGCGGGCAGG CATCCGCCGC GATCGCGTGC TGATTAAAAT TGCCTCAACT TGGGAAGGCA TCCGGGCTGC TGAAGTCCTG GAAAAAGAAG GCATTCATTG CAACCTGACC CTGCTGTTTG GCTTCCACCA AGCTGTGGCC TGCGCTGAGG CCGGCGTCAC CCTCATCTCG CCTTTTGTTG GTCGCATCCT CGATTGGTAC AAGAAGGAAT CCGGACGCGA CGCTTTCCCA GGGGCAGAAG ATCCGGGCGT CCAGTCCGTC ACCCAGATTT ACAACTACTA CAAAAAATTC GGCTATGCGA CGGAAGTGAT GGGCGCTAGC TTCCGTAACA TCAGCGAGAT CATTGAACTG GCGGGCTGCG ACCTCCTGAC GATCTCGCCG GGGCTACTGG AAGAGTTACG CCAGACCGAA GCGCTACTGG AGCGCAAGCT CGATCCCGCG ATCGCTGAAA GCCTTGAGCT GGAGCAAATT CACCTCGATC GCGATCGCTT TGCTGAACTC CACCAAGCCG ATCGCATGGC CAATGAAAAG CTAGACGAAG GCATTCGTGG TTTTTGCAAG GCGATCGATA CCCTCGAAGG CTTGCTTAAG CAACGACTAG CCGTGCTGGA AGGCAAAGCC GTTTTCCACC ACGCTGCCCA CGAAGTTTTC AGCGTCTGCG ACCTTGATGG CGATGGCTTT ATCACCCGTG AGGAATGGCT GGGCAGCGAT GCTGTCTTTG ATGCACTCGA CCTGAACAAG GACGGCAAGC TCAACGAAGA GGACTTGCTC GCCGGTCTCG GGGCTACCTT GCAAATGGCG GGGCGAGCGG TTGCGACCGT CTAA
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Protein sequence | MAANLLEQLR GMTVVVADTG DIQSIATFTP RDATTNPSLI TAAAQMPQYQ SIIDDTLRQV RTELGAEAPV EAIVAEAIDE LFVAFGLRIL EIVPGRVSTE VDARLSYDTE ATIAKARKLI GLYERAGIRR DRVLIKIAST WEGIRAAEVL EKEGIHCNLT LLFGFHQAVA CAEAGVTLIS PFVGRILDWY KKESGRDAFP GAEDPGVQSV TQIYNYYKKF GYATEVMGAS FRNISEIIEL AGCDLLTISP GLLEELRQTE ALLERKLDPA IAESLELEQI HLDRDRFAEL HQADRMANEK LDEGIRGFCK AIDTLEGLLK QRLAVLEGKA VFHHAAHEVF SVCDLDGDGF ITREEWLGSD AVFDALDLNK DGKLNEEDLL AGLGATLQMA GRAVATV
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