Gene Synpcc7942_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2297 
Symbol 
ID3774580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2367528 
End bp2368721 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content56% 
IMG OID637800745 
Producttransaldolase/EF-hand domain-containing protein 
Protein accessionYP_401314 
Protein GI81301106 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.66755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGA ATTTACTCGA ACAACTCCGC GGAATGACGG TGGTTGTCGC AGATACCGGC 
GACATTCAGT CGATCGCGAC GTTCACCCCT CGCGATGCCA CCACCAACCC TTCTCTGATC
ACAGCCGCGG CGCAAATGCC GCAGTATCAA AGCATTATTG ATGACACGCT CCGCCAAGTT
CGGACTGAGC TAGGCGCAGA AGCCCCTGTA GAAGCGATCG TGGCTGAAGC CATCGATGAA
CTGTTTGTCG CTTTTGGCTT GCGCATTCTC GAAATTGTGC CAGGGCGCGT TTCCACAGAA
GTTGATGCTC GGCTCTCCTA CGACACCGAA GCCACGATCG CTAAAGCCCG TAAGCTGATT
GGGCTGTACG AGCGGGCAGG CATCCGCCGC GATCGCGTGC TGATTAAAAT TGCCTCAACT
TGGGAAGGCA TCCGGGCTGC TGAAGTCCTG GAAAAAGAAG GCATTCATTG CAACCTGACC
CTGCTGTTTG GCTTCCACCA AGCTGTGGCC TGCGCTGAGG CCGGCGTCAC CCTCATCTCG
CCTTTTGTTG GTCGCATCCT CGATTGGTAC AAGAAGGAAT CCGGACGCGA CGCTTTCCCA
GGGGCAGAAG ATCCGGGCGT CCAGTCCGTC ACCCAGATTT ACAACTACTA CAAAAAATTC
GGCTATGCGA CGGAAGTGAT GGGCGCTAGC TTCCGTAACA TCAGCGAGAT CATTGAACTG
GCGGGCTGCG ACCTCCTGAC GATCTCGCCG GGGCTACTGG AAGAGTTACG CCAGACCGAA
GCGCTACTGG AGCGCAAGCT CGATCCCGCG ATCGCTGAAA GCCTTGAGCT GGAGCAAATT
CACCTCGATC GCGATCGCTT TGCTGAACTC CACCAAGCCG ATCGCATGGC CAATGAAAAG
CTAGACGAAG GCATTCGTGG TTTTTGCAAG GCGATCGATA CCCTCGAAGG CTTGCTTAAG
CAACGACTAG CCGTGCTGGA AGGCAAAGCC GTTTTCCACC ACGCTGCCCA CGAAGTTTTC
AGCGTCTGCG ACCTTGATGG CGATGGCTTT ATCACCCGTG AGGAATGGCT GGGCAGCGAT
GCTGTCTTTG ATGCACTCGA CCTGAACAAG GACGGCAAGC TCAACGAAGA GGACTTGCTC
GCCGGTCTCG GGGCTACCTT GCAAATGGCG GGGCGAGCGG TTGCGACCGT CTAA
 
Protein sequence
MAANLLEQLR GMTVVVADTG DIQSIATFTP RDATTNPSLI TAAAQMPQYQ SIIDDTLRQV 
RTELGAEAPV EAIVAEAIDE LFVAFGLRIL EIVPGRVSTE VDARLSYDTE ATIAKARKLI
GLYERAGIRR DRVLIKIAST WEGIRAAEVL EKEGIHCNLT LLFGFHQAVA CAEAGVTLIS
PFVGRILDWY KKESGRDAFP GAEDPGVQSV TQIYNYYKKF GYATEVMGAS FRNISEIIEL
AGCDLLTISP GLLEELRQTE ALLERKLDPA IAESLELEQI HLDRDRFAEL HQADRMANEK
LDEGIRGFCK AIDTLEGLLK QRLAVLEGKA VFHHAAHEVF SVCDLDGDGF ITREEWLGSD
AVFDALDLNK DGKLNEEDLL AGLGATLQMA GRAVATV