Gene Synpcc7942_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2274 
Symbol 
ID3774556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2340963 
End bp2342996 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content59% 
IMG OID637800721 
Productprotoporphyrin IX magnesium-chelatase 
Protein accessionYP_401291 
Protein GI81301083 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID[TIGR02031] magnesium chelatase ATPase subunit D 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTG CTGCCCCAAG TCCTACGGCA TTCCCTTTAC CGGCGGTGGT CGGCCAAGGC 
CCGATCAAGC TGGCGTTGAT TTTGGCGGCG GTGGATCCGG GTTTGGGTGG CGTCGCGATC
GCGGGTCGGC GCGGTACGGC GAAATCCGTG ATGGCGCGGG CGCTGCATGC GCTGCTGCCA
CCGATTGAAA TTCTTGAAAA CTCGTTCAAC GCCGATCCCA ACCGTGCTGG CGACTGGGAT
GCCCTGACCC AGCAGCGACA GGCCAATGGT GAAGAACTAC CCACTCGTGT CATTCCGGCG
CCCTTCTGCC AAGTGCCCCT TGGGATTACC GAAGATCGGC TCCTCGGTTC GGTCGATGTG
GCGCAATCGA TTAAGCGGGG CGAAACGGTT TTCCAGCCCG GATTATTGGC CGAAGCCCAT
CGTGGCGTCC TCTACGTCGA TGAGATCAAT CTGCTAGATG ACCAAATCGC CAACCTGTTG
CTGACGGCGA TTAGCGAAGG GCGCAACCGG ATTGAGCGGG AAGGGATCAG CATTGAGCAT
GCTTGTCGGC CCCTACTGAT CGCTACCTAT AACCCCGAAG AAGGCCCGCT ACGGCTGCAC
CTCCTCGATC GCATTGCGAT CGCCCTCTCT GCCGACGCGA TTTTAGAAAT CGAAGAGCGC
GTCCAAGCGG TTGATCAAGC CCTGCGCTAC GCCAACGATC CGGCGAAAGT GCTGGAAGCC
TACGCCGAAG AAACGGAAAG TCTGCGCACC CAAATTCTGC TGGCGAGGGA ATGGCTACCG
GATGTGACGA TCACGCCGGA ACAGATTGGC TACCTCGTGC GTGAGGCAAT TCGTGGTCAA
GTTCAAGGTC ATCGCGCCGA ACTGTTTGCG GTACGAGTCG CTCGCGCGGC CGCTGCGTTG
GAAGGCCGTA CGGAAGTTAA CGCCGATGAT CTGCGTCTTG CTGTGCAGCT CGTGATCGTG
CCACGGGCGA CCGTGCTGGA TTCACCACCA CCACCGGAAG AGCCGCCGGC CGCTCCGCCA
CCACCGCCCC CCTCCCAGGA ACAGCAGGGT GAGGATGAGC AAAATGAGCA GGAGCCAGAT
GAACCGGACG AGCCGGAAAA CGACTCGGAT GATCAGCAGC CCGATACGCC ACCACCGATT
CCGGAGGAGT TTGTCTTCGA TGCCGAGGGC GTTGTCCTCG ACCCGAGCGT TTTGGTCTTT
GCCCAGCAGT TCAGCCGCCA AGGCAAATCT GGCTCGCGAT CGCTGATCTT TTCCGAAGAT
CGGGGCCGCT ACATCAAACC GATGTTGCCG CGTGGGCCTG TCCGCCGGAT TGCGGTGGAT
GCCACGCTTC GAGCCTCCGC GCCCTACCAA AAAGCCCGCC GTCAACGCCA GCCCGATCGC
AAAGTGATCG TCGAAGATGC GGATATCCGC AGTAAACAAC TGGTGCGCAA AGCAGGTGCG
CTGGTGATCT TCCTCGTTGA TGCTTCGGGG TCGATGGCCC TGAACCGGAT GCAATCCGCC
AAAGGTGCCG TCATTCGACT GCTCACAGAA GCTTACGAAA ACCGCGATCA AGTGGCACTG
ATTCCCTTCC GGGGGGAACA GGCCGAAGTA CTGCTGCCGC CAACGCGATC GATCACCGCT
GCCCGCAAGC GTCTGGAAAA AATGCCCTGC GGGGGCGGGT CGCCGTTGGC TCATGGTCTA
ACGCAGGCGG TTCGAGTTGG AACTAACGCT GCCCAATCGG GCGATATCGG TCAGGTCGTG
ATTGTGGCGA TCACCGATGG TCGCGGCAAT ATTCCCCTCG CGCGATCGCT GGGACAACCA
ATGGAAGAAG GCGAGAAGCC AGATCTCAAA GAAGAACTGC TCGATATCGC TAAGCGGATT
CGCGGCCTAT CGATGCAACT GCTAGTCATC GATACCGAGC GTAAGTTTGT TGGCGCGGGC
TTTGGTAAAG AGCTAGCCAA TGCTGCAGGC GGTCAGTACT ACCACTTGCC CAAAGTCAGT
GATCAGGCGA TCGCGGCCAT GGCGCAAAGT GCCTTGAGAG CCACTCTTAA TTAA
 
Protein sequence
MIAAAPSPTA FPLPAVVGQG PIKLALILAA VDPGLGGVAI AGRRGTAKSV MARALHALLP 
PIEILENSFN ADPNRAGDWD ALTQQRQANG EELPTRVIPA PFCQVPLGIT EDRLLGSVDV
AQSIKRGETV FQPGLLAEAH RGVLYVDEIN LLDDQIANLL LTAISEGRNR IEREGISIEH
ACRPLLIATY NPEEGPLRLH LLDRIAIALS ADAILEIEER VQAVDQALRY ANDPAKVLEA
YAEETESLRT QILLAREWLP DVTITPEQIG YLVREAIRGQ VQGHRAELFA VRVARAAAAL
EGRTEVNADD LRLAVQLVIV PRATVLDSPP PPEEPPAAPP PPPPSQEQQG EDEQNEQEPD
EPDEPENDSD DQQPDTPPPI PEEFVFDAEG VVLDPSVLVF AQQFSRQGKS GSRSLIFSED
RGRYIKPMLP RGPVRRIAVD ATLRASAPYQ KARRQRQPDR KVIVEDADIR SKQLVRKAGA
LVIFLVDASG SMALNRMQSA KGAVIRLLTE AYENRDQVAL IPFRGEQAEV LLPPTRSITA
ARKRLEKMPC GGGSPLAHGL TQAVRVGTNA AQSGDIGQVV IVAITDGRGN IPLARSLGQP
MEEGEKPDLK EELLDIAKRI RGLSMQLLVI DTERKFVGAG FGKELANAAG GQYYHLPKVS
DQAIAAMAQS ALRATLN