| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2244 |
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| Symbol | ribH |
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| ID | 3773900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2309788 |
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| End bp | 2310333 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637800691 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_401261 |
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| Protein GI | 81301053 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000219282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.593282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGTTT TTGAAGGCAG TTTTGTCAAT GCCAGTCAGT TCCGACTGGC CGTGGTCATT
GGCCGGTTCA ATGATCTCGT CTGCGAAAAG CTCTTGGCCG GTTGCCAAGA CTGCCTCAAG
CGGCATGGGG TTGATCCAGA TCCGCAAGGA ACGCAGGTGG ATTACGCCTG GGTTCCGGGC
AGTTTCGAGA TTCCCCTCGT GGCTCGCCAA TTGGCCCTCA CGGGTCGCTA CGATGCGATC
ATCTGTCTAG GTGCGGTGAT TCGCGGCCAA ACCCCCCACT TTGACTACGT CGCCAGCGAA
GTCGCTAAAG GGGTGGCGGC AACCAGTCTA CAAACCGGCA TCCCGATCGC CTTTGGGGTG
CTGACAGTGG ATAACCTGCA GCAGGCGCTA GAGCGAGCAG GCATCAAGAG CAACCTCGGC
TGGAACTACG CCCTCAGTGC GCTGGAGATG GCGAGCCTTA TGCACCAGAT CCGCAGCACG
ACGGGAGAGG TTCCTCGCCA AACCCTGCCT CTGGCGGCGG CTCCAAGCAA TTTTGCCGGA
ACTTAA
|
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| Protein sequence | MAVFEGSFVN ASQFRLAVVI GRFNDLVCEK LLAGCQDCLK RHGVDPDPQG TQVDYAWVPG
SFEIPLVARQ LALTGRYDAI ICLGAVIRGQ TPHFDYVASE VAKGVAATSL QTGIPIAFGV
LTVDNLQQAL ERAGIKSNLG WNYALSALEM ASLMHQIRST TGEVPRQTLP LAAAPSNFAG
T
|
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