| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2235 |
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| Symbol | trmD |
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| ID | 3773891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2300665 |
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| End bp | 2301372 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800682 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_401252 |
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| Protein GI | 81301044 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.388811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGTTTG ATCTGATCAC CCTCTTCCCA GAGTTCTTCC ATAGCCCCCT GCAATCGGGA
CTGATCGCCA AAGCGATCGC AAAAGGATTG GCGGAAGTGC ACTGCACCAA CCCGCGAGAC
TTCACCTGCG ATCGCCATCA CAAGGTAGAC GATGAGCCTT ACGGCGGTGG GGCGGGAATG
GTGCTCAAGC CTGAACCTCT GGCAGCGGCG CTGGAGTCTT TGCCGGTTGT TACCCCTCGA
CAGGTGATCT ACCTCAGCCC CCAGGGCGAG CCGATGACCC AAGCGCTGTT TCAAGATTTA
GCCACGTCGG TGGAGCAGCT GGTGCTGGTC TGCGGTCACT ACGAGGGCAT CGACGAGCGA
GTGATGACCT GGATTGATCG GGAGATTTCT CTGGGTGATT TTGTGCTGAC CTGCGGCGAA
ATTCCGGCGC TAGCCCTGCT CAATGGCGTG TTGCGGTTGC GGCCCGGCAC GATTGGGAAG
GAAGAATCAC ACCGCTGCGA TAGTTTTAGC GATGGCTTGC TGGATTATCC GCACTACACG
CGGCCAGCAG AATTTCGGGG GCTGAAAGTT CCTGAAGTAT TGCTGTCGGG TAATCATGGG
GCGATCGCCG CTTGGCGACG GCAGCAGCAA CTGGAACGAA CTCGCGATCG GCGCCCCGAC
CTTTACCAAG CTTGGCAAGC CCAGCAGTCA GATCTCGACT CACATTAG
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| Protein sequence | MRFDLITLFP EFFHSPLQSG LIAKAIAKGL AEVHCTNPRD FTCDRHHKVD DEPYGGGAGM
VLKPEPLAAA LESLPVVTPR QVIYLSPQGE PMTQALFQDL ATSVEQLVLV CGHYEGIDER
VMTWIDREIS LGDFVLTCGE IPALALLNGV LRLRPGTIGK EESHRCDSFS DGLLDYPHYT
RPAEFRGLKV PEVLLSGNHG AIAAWRRQQQ LERTRDRRPD LYQAWQAQQS DLDSH
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