| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2232 |
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| Symbol | rplC |
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| ID | 3773888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2298877 |
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| End bp | 2299518 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800679 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_401249 |
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| Protein GI | 81301041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.422626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTATCG GCATACTCGG CACCAAGCTC GGCATGACCC AGATTTTCGA TGAATCTGGC
AAGGCAGTTC CCGTAACTGT CATTCAGGCT GGGCCTTGCC CAATCACTCA GATCAAAACC
GTGGCGACGG ATGGTTACAA CGCCATCCAA ATCGGTTTCT TGGAAGTGCG TGAAAAGCAA
CTGTCCAAGC CCGAGCTAGG TCACCTCTCC AAAGCAGGTG CACCGCCCCT TCGTCACCTC
TTGGAGTACC GCGTTCCCAG CACCGATGGT TTGGAGCTGG GTCAAGCCCT GACCGCCGAT
CGCTTTGAAG CGGGTCAAAA GGTGGATGTG CAAGGTCACA CCATTGGTCG TGGTTTCACC
GGTTATCAAA AGCGTCACGG TTTTGCCCGT GGCCCTATGA GCCACGGTTC GAAAAACCAT
CGTCTCCCCG GTTCGACGGG TGCAGGGACG ACGCCGGGTC GCGTCTATCC CGGTAAGCGG
ATGGCCGGTC GCTCTGGCAA CGACAAAACG ACGATTCGCG GCTTGACCGT TGTTCGAGTC
GATGCAGACC GTAATCTGCT TCTAGTCAAA GGTTCGGTTC CGGGTAAACC AGGCGCTCTG
CTCAACATCA CGCCCGCCAC TGTGGTCGGG CAGCAGGCCT AA
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| Protein sequence | MSIGILGTKL GMTQIFDESG KAVPVTVIQA GPCPITQIKT VATDGYNAIQ IGFLEVREKQ
LSKPELGHLS KAGAPPLRHL LEYRVPSTDG LELGQALTAD RFEAGQKVDV QGHTIGRGFT
GYQKRHGFAR GPMSHGSKNH RLPGSTGAGT TPGRVYPGKR MAGRSGNDKT TIRGLTVVRV
DADRNLLLVK GSVPGKPGAL LNITPATVVG QQA
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