| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2218 |
|---|
| Symbol | rplF |
|---|
| ID | 3773874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2292352 |
|---|
| End bp | 2292891 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800665 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_401235 |
|---|
| Protein GI | 81301027 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.545954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCGTA TTGGTAAACG TCCCATCCCT ATCCCCGCAA AGGTCAGTGT CGCGATCGAC
GGCCGTTTGG TGTCCGTAAA AGGCCCAAAA GGTGAACTCA GTCGTGAGCT GCCTAGCGGC
GTTGTCGTGA CCCAAGAAGA CGGCAACATT ATCGTGTCGC GCGCTGACGA ATCGCGCCTT
GCCCGCCAAC GTCATGGTCT TAGCCGGACG CTGGTTGCCA ACTTGGTTGA GGGCGTTGAT
TCAGGCTTCC AAAAGCGCTT GGAAATCATC GGCGTTGGCT ATCGGGCCCA GGTTCAAGGC
ACCACTTTGA TCCTGAACGT TGGCTACAGC AACCCCGTGC AAATTGAACC GCCGGAAGGT
ATTCAGTTTG TGGTCGAGAA CAACACCAAC GTGGTTGTTA GCGGCATCAG CAAGGAAGTC
GTGGGTAACA CGGCTGCCCG TATCCGCGCC GTACGGCCCC CCGAACCCTA CAAGGGCAAA
GGGATTCGCT ATGCAGGCGA GGTCGTCCTC CGTAAGGCTG GCAAGACAGG TAAGAAGTGA
|
|---|
| Protein sequence | MSRIGKRPIP IPAKVSVAID GRLVSVKGPK GELSRELPSG VVVTQEDGNI IVSRADESRL
ARQRHGLSRT LVANLVEGVD SGFQKRLEII GVGYRAQVQG TTLILNVGYS NPVQIEPPEG
IQFVVENNTN VVVSGISKEV VGNTAARIRA VRPPEPYKGK GIRYAGEVVL RKAGKTGKK
|
|---|
| |