Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2217 |
Symbol | rplR |
ID | 3773873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2291990 |
End bp | 2292352 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800664 |
Product | 50S ribosomal protein L18 |
Protein accession | YP_401234 |
Protein GI | 81301026 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0256] Ribosomal protein L18 |
TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.442401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA GTCGTCGCGA ATCCACCCGT CGCAGACACC GCCGTGTTCG CCGCACGATT GTCGGCACGC CGGCTCGTCC GCGTCTCTCG GTATTTCGCT CCAACAACCA CATTTACGCG CAAGTGATCG ACGATGCTGC AGGCCACACC CTGGCAGCAG CATCCAGTCT CGATCCCGAT CTGCGCCAAT CATTGACGTC TGGTGGCAAC CAGCAAGCTT CGGCAGCCGT AGGCAAATTA ATTGCCGAAC GGGCTCAAGC CAAGGGCGTT ACGACTGTCG TGTTCGATCG CGGCGGCAAC CTTTACCATG GTCGCGTCAA GGCTTTGGCC GAAGCGGCTC GCGAAGCTGG ACTGGAGTTC TAG
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Protein sequence | MKVSRRESTR RRHRRVRRTI VGTPARPRLS VFRSNNHIYA QVIDDAAGHT LAAASSLDPD LRQSLTSGGN QQASAAVGKL IAERAQAKGV TTVVFDRGGN LYHGRVKALA EAAREAGLEF
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