Gene Synpcc7942_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2217 
SymbolrplR 
ID3773873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2291990 
End bp2292352 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content59% 
IMG OID637800664 
Product50S ribosomal protein L18 
Protein accessionYP_401234 
Protein GI81301026 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.442401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA GTCGTCGCGA ATCCACCCGT CGCAGACACC GCCGTGTTCG CCGCACGATT 
GTCGGCACGC CGGCTCGTCC GCGTCTCTCG GTATTTCGCT CCAACAACCA CATTTACGCG
CAAGTGATCG ACGATGCTGC AGGCCACACC CTGGCAGCAG CATCCAGTCT CGATCCCGAT
CTGCGCCAAT CATTGACGTC TGGTGGCAAC CAGCAAGCTT CGGCAGCCGT AGGCAAATTA
ATTGCCGAAC GGGCTCAAGC CAAGGGCGTT ACGACTGTCG TGTTCGATCG CGGCGGCAAC
CTTTACCATG GTCGCGTCAA GGCTTTGGCC GAAGCGGCTC GCGAAGCTGG ACTGGAGTTC
TAG
 
Protein sequence
MKVSRRESTR RRHRRVRRTI VGTPARPRLS VFRSNNHIYA QVIDDAAGHT LAAASSLDPD 
LRQSLTSGGN QQASAAVGKL IAERAQAKGV TTVVFDRGGN LYHGRVKALA EAAREAGLEF