Gene Synpcc7942_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2202 
Symbol 
ID3773759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2282672 
End bp2283169 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content54% 
IMG OID637800647 
ProductHNH nuclease 
Protein accessionYP_401219 
Protein GI81301011 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.815076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGG TTTTAGTGCT CAACGCTTCC TACGAGCCAC TCAACATCAC GAGCTGGCGG 
CGAGCAGTGA TCTTGCTTTT GAAAGATAAG GCTGAAAGTT TAGAGCACAA CGGTCGAATG
ATCCTGCCTG ATCTACCACT TCCGACGGTG ATTCGACTAC GTCAATACGT CCGTATTCCC
TACAACGAGA TCCCACTAAC CCGTCGAAAT GTTTTGCATC GAGACGGTCA TTCCTGTCAG
TATTGCGGCT ATCACGGTGA GAATCTGACC CTCGACCACA TCTTGCCACG ATCGCGGGGG
GGAGCCGATA CCTGGGAGAA CGTGATTACG GCCTGCATGC GCTGCAACGT TCACAAGGGC
AACCGTACGC CTAAAGAGGC AGGGATGCCC CTGATGAGCA CACCGCGCCA ACCCGTCAGC
AGCCTCTACT TTGAGATTTC ACGCTATCTC AACCAAGGCA GCCACCAAGA ATGGCGCAAG
TACGTGATCG GGGCTTAA
 
Protein sequence
MGKVLVLNAS YEPLNITSWR RAVILLLKDK AESLEHNGRM ILPDLPLPTV IRLRQYVRIP 
YNEIPLTRRN VLHRDGHSCQ YCGYHGENLT LDHILPRSRG GADTWENVIT ACMRCNVHKG
NRTPKEAGMP LMSTPRQPVS SLYFEISRYL NQGSHQEWRK YVIGA