Gene Synpcc7942_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2195 
Symbol 
ID3773752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2272975 
End bp2274900 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content59% 
IMG OID637800640 
Productputative adenylate/guanylate cyclase 
Protein accessionYP_401212 
Protein GI81301004 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.595097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCG CTCGGCGGTT AGGCTGGTCG CTTCCCACAG CACTGGCGGG TGCGATCGCC 
CTCGCCGGGT TGTTGCTCTC ACCGTTGGCA ATCAGTCCAC TGACCCAACC GGGGCGCTGG
CTAGATGCGG TGTTATTGAG TGCGGCCTTT CGGTTGCGAG GCCCCCAAGC CCCAGATCCC
GCGATCGCAA TCGTGGTGAT CGATGAGGAT TCGCTGCGAC TGGGTGATCT GTTCACGGCA
GCGGAGTTAG AGGCACGTCC GCCTCTGGCA GATCTTCAAG ACTGGCCCTG GCCGCGCCGC
ATTTACGCCT TGGCGCTCCA GCGTTTGCGA GCTGCCGGGG CGCGACGGGT CATCTTCGAT
ATTGTTTTTG CCACTCCTAG CCGCTTTGGA CCGGATGATG ATCGCCGCTT TGCGGATGCG
ATCGCCCAAG CCGGATCGTC CGTGACGCTC GCTGGAGAAC TGGAGCAGGT TGATCGTAGT
GCCGGACTTA GTCAGGCTAG CCTCGCTCAA CCCATCTATG AACATCCCTT TGGCCTAGCC
AATCTGATAG CAGGCGCAGA TGGCAGTCTG CAAGCGATCC CCGGTCAAGA CTGGCTTCAA
CCTTGGCAAA TCTTACAAGC CCGCGATCGC CCGCCTCTAT CTAACCTTGC GAGTGCAGCT
CTGGGACAGG CGCCGCCGCC TCTCTCCTTA GGCATCAACT ACAGCGGCCC TGAGGGAACC
TATCCACGCT GGCCATTTTG GGCGTTGTTC GATCCAGAAC TCTGGCAGGG ACCACTGCAG
CAAGGTGCTG TCTTTCGCGA TCGCGATGTT TTGATTGGGG CCAGTGCCAG CAGTCTGGGC
GATCGCCATG CCACACCCTT TGCCGACAGC ATGGCCGGTG TCGAGATCCA AGCCAATGCG
ATCGCCACCC TCCGCAGTCA ACGCGGTTTG CGATCGCTTC CGCAAGTTTG GTTATCGCTG
CTATTGATCC TTGTGGCCCT GCTCCAGATC TGGGGTGTTC AGCGCTGTCC GAGTCCGCTT
AGCAAAGCAC TCTGGACGTT GGGGATCACG AGCGCAGTCT TACTGGCTTG CTTCATCGCC
TTTTTGCAAA CTTGGCTGGT GTCGCCCACC GCCTTGCTCC TTGTGCCATT GCTGGCAGGC
ATCGGTGACA GTGCCAACAG CGCTTGGCAA GTGCAACGGG AACGGCGATC GCTACGACGC
GCCTTAGCGC TGCGGGTGTC GCCAGCCTTA CTGGGTACGA TTCTGGCGCA GCGGGATGCG
GTAGCCAATC AGCTCGGTGG GCATAACTGC GAAGCAGTGA TCCTGTTTTC GGATCTGCGT
GGGTTTACGC AGTTGTCCAG CCAAATCGAC TCGACTGTGT TGGTGGCGCT GCTCAATCGC
TACTTTGAGG CGATGGCCCA GCCGATTCTG GCGGCGCAGG GGTTGATCGA TAAATTTGTT
GGCGATGCGA TCATGGCGGA GTTTGGGCTG CCGCTCAGTC GGGGCACCGT GATCGAAGCC
CAGGCGGCGA TTCAAGCAGC CCTCGCCATG CGGCGATCGC TCGCCCGTTT GCGAGCTGAA
TTAGTCGCTG AAGGCTTACC ACCTTTGTTT CATGGCATTG GACTGAATTT CGGGACAGTA
GTCGCTGGCA ATCTAGGCGC GCCCGAGCGG CTGGAATATA CCGTGATTGG CGATGCGGTT
AATATCGCTG CCCGTCTGGA AAGTCTGACC AAGACACTGG GCTATGACAT CATCATTTCC
CAAGCGCTCT ATGAGCAGGT GCAAGAGCAG GTTGAAGTGA TGCCCTTGGG CCTCCAACAG
CTCGCTGGGC GATCGCAGCC GGTGTTCACC TATGCTGTCT TGGATGAGCA GGGCGGCGAT
GGGCAATTAG CCCGTCAGGT CCAGCAAGAT TATCAGGCGT GGCAACAAGG GATAAATCGG
ACGTGA
 
Protein sequence
MAIARRLGWS LPTALAGAIA LAGLLLSPLA ISPLTQPGRW LDAVLLSAAF RLRGPQAPDP 
AIAIVVIDED SLRLGDLFTA AELEARPPLA DLQDWPWPRR IYALALQRLR AAGARRVIFD
IVFATPSRFG PDDDRRFADA IAQAGSSVTL AGELEQVDRS AGLSQASLAQ PIYEHPFGLA
NLIAGADGSL QAIPGQDWLQ PWQILQARDR PPLSNLASAA LGQAPPPLSL GINYSGPEGT
YPRWPFWALF DPELWQGPLQ QGAVFRDRDV LIGASASSLG DRHATPFADS MAGVEIQANA
IATLRSQRGL RSLPQVWLSL LLILVALLQI WGVQRCPSPL SKALWTLGIT SAVLLACFIA
FLQTWLVSPT ALLLVPLLAG IGDSANSAWQ VQRERRSLRR ALALRVSPAL LGTILAQRDA
VANQLGGHNC EAVILFSDLR GFTQLSSQID STVLVALLNR YFEAMAQPIL AAQGLIDKFV
GDAIMAEFGL PLSRGTVIEA QAAIQAALAM RRSLARLRAE LVAEGLPPLF HGIGLNFGTV
VAGNLGAPER LEYTVIGDAV NIAARLESLT KTLGYDIIIS QALYEQVQEQ VEVMPLGLQQ
LAGRSQPVFT YAVLDEQGGD GQLARQVQQD YQAWQQGINR T