Gene Synpcc7942_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2193 
Symbol 
ID3773750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2270973 
End bp2272655 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content56% 
IMG OID637800638 
Productmetal dependent phosphohydrolase 
Protein accessionYP_401210 
Protein GI81301002 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.579233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.606327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTG CAGACCATGT AGAACCAGCG ATCGCGCCTG ATCGATCTGA GGCGAAGGCC 
ACAGCAACCC TACTGGAGCG ACTGCTCGCG ATCGGCACTG CCCTTTCTGC TTGCCGAGAT
CCCGATCAGT TACTGAGCTT GATTTTGCAG AGTAGCCGGG ATCTGACCTG CAGTGACGGT
GGCAGTTTGT ACCTCGTTGA TCGCAGTGAT CCGCAGCAGC CTTGGCTGCG CTTCCAAATT
TTCCAGAGCG ACAGCTTGCC CAGTTCCCTT GAAGCCCCGC CACCGCTACC CCTCGATCGC
CATAGTTTGG CGGGCTATGT GGCAGCGACC GGCGAAACCC TGAATCTGGC CGATGTTTAT
GCTTTGGACG GGCAACAACC GTTTCAGTTC AACGCCAGCT TCGACCAGCG GTTGAACTAC
CGCACCTGCT CGATGTTAGT GCTGCCGATG TGCGATCAAA CCGGCAGTGT GATCGGGGTG
ATCCAACTGG TCAATCGCAA ACGCCGGGCA GATCTGAAGC TGACGGCGGC GATCGCCTCA
GAAGAAACCC AGCCCTACAG TGCGGCTGAA GAAGCACTCT TACGATCACT AGCCGGTCAA
GCCGCGATCG CAATCGAACG AACCCTGTTG CAGCGCAGTA TTGAAAATCT GTTTGAGGGC
TTTATCTGCG CCTCGATCAA GATCATCGAA TCCCGCGATC CCTGCACGAT GGGTCATTCC
GAGCGGGTGG CGCAACTCTC TGTTCGCTTG GCTGAACAAG TGCATGCCGT CGATCACGGT
GCGTTAGCGG CTTATCAATT CAGCAATGCC CAACTGCAAG AGCTGCACTA CGCCTCACTG
CTCCATGACT TTGGCAAAGT GGGGGTTCCT GAGGAGATTC TCAACAAGTC GCATAAGCTG
CATCCAACTG AGCAACAGGG GCTGAACTAC CGACTGCAAC TACTGCAGCA GCAACTGCAA
CTGGAGCAAG CCCGTCGTTG GCTGGCTCCA ACCCTGACGG AGGCGATGCA ACGGGCTGGG
CTAGGGCATC CTCTGGACTG TATCTGGTGT CGGCAGTTTG GCAATTTAGC TGACCTAGAG
GTCACGATCG CCCGACTCCA ACAGGCACGA TCGCTGCTGC AGGATCTCAA TCAGCCACAA
ATTTTGGCAA CCCCCGCCTA TCGCGATCGC TTAGCGGAGG TGGAAGCGGA ATTAGCCTGG
CTGGCGTCCC TGCAGGTCAT GGACTGGGAT GGTCAGATGC GATCGCTGCT CGCGCCTGCA
GAAGTGGAGA AATTACTGAT TCCGAAGGGG AGTCTCACGC AGCAGGAGCG CTTGGCGATC
GAGTCACACG TTCAGCACAC CTTCGCTTTT TTACAGGAGA TCCCTTGGAC GGGACCCTTA
GCGCAGGTGC CGCATATTGC CCATGCCCAC CACGAGCGCT TGGACGGTAG TGGCTATCCC
CTCGGATTAG AACAGGCACA AATTCCAATG CAGGCGCAAA TTATGGCGGT TGCTGATGTT
TATGATGCGC TGACGGCTAG CGATCGCCCC TACAAACGCC GCGTTCCGAT TGAAAAAGCG
CTGCAAATTC TAGAGTGGGA AGCCCGCGAT CGCAAACTGA ATGATCAGTT GGTTCAACTC
TTTCGGCAGC AGCAAATCTT CCAAATTCTT GGCCATCAGC TTCAGTCTGA AGACAGTGTC
TAA
 
Protein sequence
MAAADHVEPA IAPDRSEAKA TATLLERLLA IGTALSACRD PDQLLSLILQ SSRDLTCSDG 
GSLYLVDRSD PQQPWLRFQI FQSDSLPSSL EAPPPLPLDR HSLAGYVAAT GETLNLADVY
ALDGQQPFQF NASFDQRLNY RTCSMLVLPM CDQTGSVIGV IQLVNRKRRA DLKLTAAIAS
EETQPYSAAE EALLRSLAGQ AAIAIERTLL QRSIENLFEG FICASIKIIE SRDPCTMGHS
ERVAQLSVRL AEQVHAVDHG ALAAYQFSNA QLQELHYASL LHDFGKVGVP EEILNKSHKL
HPTEQQGLNY RLQLLQQQLQ LEQARRWLAP TLTEAMQRAG LGHPLDCIWC RQFGNLADLE
VTIARLQQAR SLLQDLNQPQ ILATPAYRDR LAEVEAELAW LASLQVMDWD GQMRSLLAPA
EVEKLLIPKG SLTQQERLAI ESHVQHTFAF LQEIPWTGPL AQVPHIAHAH HERLDGSGYP
LGLEQAQIPM QAQIMAVADV YDALTASDRP YKRRVPIEKA LQILEWEARD RKLNDQLVQL
FRQQQIFQIL GHQLQSEDSV