Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2193 |
Symbol | |
ID | 3773750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2270973 |
End bp | 2272655 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637800638 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_401210 |
Protein GI | 81301002 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.579233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.606327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGCTG CAGACCATGT AGAACCAGCG ATCGCGCCTG ATCGATCTGA GGCGAAGGCC ACAGCAACCC TACTGGAGCG ACTGCTCGCG ATCGGCACTG CCCTTTCTGC TTGCCGAGAT CCCGATCAGT TACTGAGCTT GATTTTGCAG AGTAGCCGGG ATCTGACCTG CAGTGACGGT GGCAGTTTGT ACCTCGTTGA TCGCAGTGAT CCGCAGCAGC CTTGGCTGCG CTTCCAAATT TTCCAGAGCG ACAGCTTGCC CAGTTCCCTT GAAGCCCCGC CACCGCTACC CCTCGATCGC CATAGTTTGG CGGGCTATGT GGCAGCGACC GGCGAAACCC TGAATCTGGC CGATGTTTAT GCTTTGGACG GGCAACAACC GTTTCAGTTC AACGCCAGCT TCGACCAGCG GTTGAACTAC CGCACCTGCT CGATGTTAGT GCTGCCGATG TGCGATCAAA CCGGCAGTGT GATCGGGGTG ATCCAACTGG TCAATCGCAA ACGCCGGGCA GATCTGAAGC TGACGGCGGC GATCGCCTCA GAAGAAACCC AGCCCTACAG TGCGGCTGAA GAAGCACTCT TACGATCACT AGCCGGTCAA GCCGCGATCG CAATCGAACG AACCCTGTTG CAGCGCAGTA TTGAAAATCT GTTTGAGGGC TTTATCTGCG CCTCGATCAA GATCATCGAA TCCCGCGATC CCTGCACGAT GGGTCATTCC GAGCGGGTGG CGCAACTCTC TGTTCGCTTG GCTGAACAAG TGCATGCCGT CGATCACGGT GCGTTAGCGG CTTATCAATT CAGCAATGCC CAACTGCAAG AGCTGCACTA CGCCTCACTG CTCCATGACT TTGGCAAAGT GGGGGTTCCT GAGGAGATTC TCAACAAGTC GCATAAGCTG CATCCAACTG AGCAACAGGG GCTGAACTAC CGACTGCAAC TACTGCAGCA GCAACTGCAA CTGGAGCAAG CCCGTCGTTG GCTGGCTCCA ACCCTGACGG AGGCGATGCA ACGGGCTGGG CTAGGGCATC CTCTGGACTG TATCTGGTGT CGGCAGTTTG GCAATTTAGC TGACCTAGAG GTCACGATCG CCCGACTCCA ACAGGCACGA TCGCTGCTGC AGGATCTCAA TCAGCCACAA ATTTTGGCAA CCCCCGCCTA TCGCGATCGC TTAGCGGAGG TGGAAGCGGA ATTAGCCTGG CTGGCGTCCC TGCAGGTCAT GGACTGGGAT GGTCAGATGC GATCGCTGCT CGCGCCTGCA GAAGTGGAGA AATTACTGAT TCCGAAGGGG AGTCTCACGC AGCAGGAGCG CTTGGCGATC GAGTCACACG TTCAGCACAC CTTCGCTTTT TTACAGGAGA TCCCTTGGAC GGGACCCTTA GCGCAGGTGC CGCATATTGC CCATGCCCAC CACGAGCGCT TGGACGGTAG TGGCTATCCC CTCGGATTAG AACAGGCACA AATTCCAATG CAGGCGCAAA TTATGGCGGT TGCTGATGTT TATGATGCGC TGACGGCTAG CGATCGCCCC TACAAACGCC GCGTTCCGAT TGAAAAAGCG CTGCAAATTC TAGAGTGGGA AGCCCGCGAT CGCAAACTGA ATGATCAGTT GGTTCAACTC TTTCGGCAGC AGCAAATCTT CCAAATTCTT GGCCATCAGC TTCAGTCTGA AGACAGTGTC TAA
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Protein sequence | MAAADHVEPA IAPDRSEAKA TATLLERLLA IGTALSACRD PDQLLSLILQ SSRDLTCSDG GSLYLVDRSD PQQPWLRFQI FQSDSLPSSL EAPPPLPLDR HSLAGYVAAT GETLNLADVY ALDGQQPFQF NASFDQRLNY RTCSMLVLPM CDQTGSVIGV IQLVNRKRRA DLKLTAAIAS EETQPYSAAE EALLRSLAGQ AAIAIERTLL QRSIENLFEG FICASIKIIE SRDPCTMGHS ERVAQLSVRL AEQVHAVDHG ALAAYQFSNA QLQELHYASL LHDFGKVGVP EEILNKSHKL HPTEQQGLNY RLQLLQQQLQ LEQARRWLAP TLTEAMQRAG LGHPLDCIWC RQFGNLADLE VTIARLQQAR SLLQDLNQPQ ILATPAYRDR LAEVEAELAW LASLQVMDWD GQMRSLLAPA EVEKLLIPKG SLTQQERLAI ESHVQHTFAF LQEIPWTGPL AQVPHIAHAH HERLDGSGYP LGLEQAQIPM QAQIMAVADV YDALTASDRP YKRRVPIEKA LQILEWEARD RKLNDQLVQL FRQQQIFQIL GHQLQSEDSV
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