Gene Synpcc7942_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2184 
Symbol 
ID3773741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2262518 
End bp2263318 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content59% 
IMG OID637800629 
Producthypothetical protein 
Protein accessionYP_401201 
Protein GI81300993 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.817401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAAC TCCTGGGGAT GAGTGCCAAC ACCCCCACTG ATCTCTGCTT TTCGTTCCGG 
GGATTTTCGG CCCGAGGTGG CCGGACAGGA GAGCATCGCG ATGGCTGGGG CTGTGCATTT
TATCTGGGCG ATCGCCTACT GCGGGTGCGG GACCCAGAAC CAGCGGCCGA GTCGCCCCTC
GCCGATGTAT TTCGCAAAAT CCCGATTCGA TCCAAGCTAG CCCTTTCGCA TATTCGCAAG
GCGACGCAAG GCACGATCGA TCGCCGCAAT TGCCACCCCT TTTCCCAGCG ACTGGGCGAT
CGCGAATGGG TGTTTGCGCA CAATGGCCAT ATCGACTTTG ACCTGCTGCG CGATCGCTGT
CCTCTGGGGC GCTACCAGCC CCAAGGCGAG ACCGATAGCG AACATCTGTT CTGCTGGATC
CTCGATCGCC TTACCCACTT AACAGAACCG CAGCCCGAGC AAGTGCTACC GATTCTGCGC
GACCTCAGCG ATCGCTTTCC CAGCCCCAGC ATCGTCAACT TTCTATTGGG CGACGGCCGC
TACCTCTACG CCCATTGCTC AACAGCTTTA GCGTGGGTGA CGCGGCGCTA TCCCTTCACC
CGAGCCAGCT TGATCGATGA AGATCACGCG ATCGATTTCT CTGGCTGCAC CAGTCCCAGC
GATGTAGTCA GCATCATTGC TACCCGCCCC CTCACCCAAG ACGAGGTTTG GACGGTTCTC
AAGCCGGGTG ATCTGCTGGT TCTAGCGGAA GGCGAGGTTG TAGCACCATC GGCAACCCAC
CCGATCGCGA TCGCCTCATA A
 
Protein sequence
MCELLGMSAN TPTDLCFSFR GFSARGGRTG EHRDGWGCAF YLGDRLLRVR DPEPAAESPL 
ADVFRKIPIR SKLALSHIRK ATQGTIDRRN CHPFSQRLGD REWVFAHNGH IDFDLLRDRC
PLGRYQPQGE TDSEHLFCWI LDRLTHLTEP QPEQVLPILR DLSDRFPSPS IVNFLLGDGR
YLYAHCSTAL AWVTRRYPFT RASLIDEDHA IDFSGCTSPS DVVSIIATRP LTQDEVWTVL
KPGDLLVLAE GEVVAPSATH PIAIAS