Gene Synpcc7942_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2180 
Symbol 
ID3773737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2259490 
End bp2259927 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content56% 
IMG OID637800625 
Productbacterioferritin comigratory protein 
Protein accessionYP_401197 
Protein GI81300989 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.739986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA CTGTAGGTAC TGCTGCACCC GACTTTACCG CTCTCGATGA TGCGGGCCAG 
AGCATTCAGC TCTCGCAATT CCGAGGCAAG ACGATCGTTC TCTACTTCTA TCCGAAGGAC
GATACCCCTG GCTGCACCAA AGAGGCTTGC AGCTTCCGTG ATTCCTACAG CGCCTACCAA
GGTAAAGACA TTATTGTCTT GGGCGTCAGC ACGGATGATT CCAGCTCCCA CGAACAATTT
AAGACCAAGT TCAGCTTGCC CTTCCCGCTG GTGGCGGACC CCGATCGCAG CATCACTCAG
GCTTACGATG TCGATGGCGG CGGCTACGCC AAGCGCGTCA CCTACGTGAT TGACGGCGAA
GGCCAAATTA TTCGCGTCTA CGACAGCGTC AAAACGGACA CCCATGCCGG CGACATCCTC
GCTGACCTAG GACTCTAG
 
Protein sequence
MALTVGTAAP DFTALDDAGQ SIQLSQFRGK TIVLYFYPKD DTPGCTKEAC SFRDSYSAYQ 
GKDIIVLGVS TDDSSSHEQF KTKFSLPFPL VADPDRSITQ AYDVDGGGYA KRVTYVIDGE
GQIIRVYDSV KTDTHAGDIL ADLGL