| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2179 |
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| Symbol | |
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| ID | 3773736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2258445 |
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| End bp | 2259359 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800624 |
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| Product | putative lipid kinase |
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| Protein accession | YP_401196 |
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| Protein GI | 81300988 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.786183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAAGGA GCAATGTTCT GAAGCAACGT GCCCTCTTGC TCGTTAATCG GCGATCGCGC
CGAGGTCGTA AGCTGCTCAA ACCAGCGATC GCGCAGCTGG AAGCGGCTGG GTTTGAGTTG
GTTCAACCCT ACCTCGATCG TCACAGTGAT TATTCGGAGC TAATTACAGC CCACCGCGAT
CGCGTCGATC TGGTCATTAT TGGGGGCGGC GACGGCAGCC TCAACGCCGC AGCCCGAGGG
CTTGTTGAAA CGCAGCTTCC CTTAGGAGTT TTGCCCCTCG GTACCGCGAA TGATCTGGCT
CGCACCCTGG CCCTACCGAC GGATCTCAGT CAAGCCTGCC AAGTCATTGC CCGAGGGCAA
ACCCAAGCCG TCGACCTCGG TTGGGTCAAC GGTTACTACT TTTTTAACGT CGCTAGTTTG
GGGCTGAGCG TCAAAATTAC CCAGGGCTTG ACCTCGGGCG TCAAGCGCCG TTGGGGTGTC
CTGGCCTACG CTCTCGTCGC TCTGCGATCG CTCTGGCGTT TCCGCCCTTT TCGCGCCGAG
ATTCAGATTG GCGATCGCCG GCTCCAGACT AAAACTGTCC AGATTGCAGT TGGCAATGGT
CGCTACTACG GCGGTGGGCT CTCCGTCGCC CACGATGCTG CGATCGATGA TCAACGACTC
GATCTCTATA GTCTCTCGAT CAATCACTGG TGGCAGATTG TTCCCTTGCT ACCATCGCTC
TATCACGGGC GTTACCCTTC GCCGCTGACA GAGCAATGTG GCCCAGGCGA GACCATTGAA
ATCCGCACCC GTCGTCATCG CCACATCAAC ACAGATGGTG AAATCCACAC CACGACGCCT
GCTCAATTTC GTGTCATTCC CCAAGCGCTG CGAATTTTTG TGCCAGTTAC AGCGGCGTCG
CCCCCAACAC TGTGA
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| Protein sequence | MLRSNVLKQR ALLLVNRRSR RGRKLLKPAI AQLEAAGFEL VQPYLDRHSD YSELITAHRD
RVDLVIIGGG DGSLNAAARG LVETQLPLGV LPLGTANDLA RTLALPTDLS QACQVIARGQ
TQAVDLGWVN GYYFFNVASL GLSVKITQGL TSGVKRRWGV LAYALVALRS LWRFRPFRAE
IQIGDRRLQT KTVQIAVGNG RYYGGGLSVA HDAAIDDQRL DLYSLSINHW WQIVPLLPSL
YHGRYPSPLT EQCGPGETIE IRTRRHRHIN TDGEIHTTTP AQFRVIPQAL RIFVPVTAAS
PPTL
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