Gene Synpcc7942_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2178 
Symbol 
ID3773735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2258054 
End bp2258395 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content53% 
IMG OID637800623 
Producthypothetical protein 
Protein accessionYP_401195 
Protein GI81300987 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.71562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTAC TGGTGACTTG GCTGGTGACC GCTTTTGCCC TGCTGATTGT GGCTTGGTTG 
CCTACTGGCG TCGAAATTGA TGGTTTTGGC AAAGCCCTCG TTGCCGCTCT GGTCTTTGGC
CTGCTGAATG CTTTGGTCAA GCCGGTACTT CAGGTTTTGG CGCTGCCGCT CAATATTTTG
ACCCTTGGTC TCTTCAGCTT TGTAGTCAAT GCAGCTGTGT TTGCCTTGGC CGCAACTTTA
GTCAGTGGCT TCAGCCTGCG CAATGGTTTT TGGTCAGCCT TGTTGGGTTC GATCGCCCTC
AGCCTCGTTT CGCGGCTCTT GGGTCTGATT CTGCCGAGCT AG
 
Protein sequence
MDLLVTWLVT AFALLIVAWL PTGVEIDGFG KALVAALVFG LLNALVKPVL QVLALPLNIL 
TLGLFSFVVN AAVFALAATL VSGFSLRNGF WSALLGSIAL SLVSRLLGLI LPS