Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2177 |
Symbol | |
ID | 3773734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2257143 |
End bp | 2258033 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800622 |
Product | integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD |
Protein accession | YP_401194 |
Protein GI | 81300986 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.801545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCATCGAG CGCTTGGGAT GGCAAGCCCA GACCTCTCAC AACTGGCTCA ATTGGCCATC AATGGTCTGG CGACCGGCAG CCTCCTGGCC CTAGCCGCAA CGGGTCTGAC CTTGATCTAC GGCATCCTGC GACTGACCAA TTTTGCCCAA GGCGAGTTTT TGACCCTCGG CGCTTACTTC ACGTTGGTTG CCAACAGCCT TGGGCTCAGT CTCTGGCTGG CCATTCCTCT CGGGGCGATC GCGACGATCG CACTTTGCTT GCTGGGCGAA GCAGTTTTGT GGGAACCGCT GCGGCGGCAA CGGGTGAACA CCACCACTCT GATCATCCTG ACTATTGGCC TGTCGCTGTT CCTGCGCAAT CTGGTGATTT TGATTTGGGG CGCGGGCAAT CAGGCCTACC GGCTGGCAGT CCAACCGGCC TTAACCCTCT GGGGACTCAG GATCACGCTC AATAGCCTCC TCGTGGTGAT TGGGGCAGCT GCCGCTTTGG TTCTGTTGCA CTGGGTTTTG CAGCGCACCA GCATCGGCAA GGGCATGCGA GCGATCGCTG ATGACCCCGA CCTGGCACGG GTCAGTGGCG TACCAGTCGA AACCGTGATC CGCTGGACTT GGGTGATTGC GGGCGGTCTG ACAGCGATCG CAGGGGGCCT CTACGGATTG ATCACTGCTG TCCGTCCCAC TATGGGCTGG AATTTGATCC TGCCGCTGTT TGCCAGCGCC ATCCTCGGAG GGATTGGTAG CCCTTACGGT GCGATCGCAG GAGGGCTGAT TCTGGGATTT GCCCAAGAAC TCAGCACTTA CTGGCTGCCA GCGGAATACA AGCTTGCCGT TGCCTTTGTC ATCTTGATTG GCGTGCTGGT GATCCGGCCC CAAGGCCTAT TTGCTCGCTA G
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Protein sequence | MHRALGMASP DLSQLAQLAI NGLATGSLLA LAATGLTLIY GILRLTNFAQ GEFLTLGAYF TLVANSLGLS LWLAIPLGAI ATIALCLLGE AVLWEPLRRQ RVNTTTLIIL TIGLSLFLRN LVILIWGAGN QAYRLAVQPA LTLWGLRITL NSLLVVIGAA AALVLLHWVL QRTSIGKGMR AIADDPDLAR VSGVPVETVI RWTWVIAGGL TAIAGGLYGL ITAVRPTMGW NLILPLFASA ILGGIGSPYG AIAGGLILGF AQELSTYWLP AEYKLAVAFV ILIGVLVIRP QGLFAR
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