Gene Synpcc7942_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2173 
Symbol 
ID3773730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2253218 
End bp2253778 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID637800618 
Producthypothetical protein 
Protein accessionYP_401190 
Protein GI81300982 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.5622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC CGTTCTACCT AGAGGGGTAT TTTCTAGGGC TGCAAGATCC CGATACCCCC 
GACAACATTC GCTTTATTCA CGTTCAGAGT GACGGAGGCA ACCGCTACAC CCTCAAGTTG
GCTAAGCCAC TGCGACACTT ACCCTGGCAA CAGTTGACAG TGGGGCAACC TCTGCGGATT
GAAGGTCAGC AGTCCTTTCA AGGTCTAGAT CTGCCCCCCA AGCTCAAAGC AGAGCGGGTT
TTATTCGATC CTGCTGGCTT ACCAGCCTTC ATTGCCTCTG AGGAACCCCC CAAGCCCCAA
CCAGCTGTTT TAGAAGTCTG TACGAGGGGA ACCTGTCGCC GACGCGGCGC GCTGGAATTG
TGCGATCGCC TGCAGGCTGA AGCAAAAACC TGTGCAGTTG AGGTGCGAAC GAGAGGTTGT
CTCGGCCGCT GTAAGCAAGG CATCAATGTC CGGCGCAGCT CCGACAACCA GATTCTGTCA
CAGCTTTCAC CGCAGGCTGC CGCCGAGCTG CTTTCGCCCT GGCGAACCCC AGCGGTTGTC
TCAGGCACTG CCGTGGGCTA A
 
Protein sequence
MKLPFYLEGY FLGLQDPDTP DNIRFIHVQS DGGNRYTLKL AKPLRHLPWQ QLTVGQPLRI 
EGQQSFQGLD LPPKLKAERV LFDPAGLPAF IASEEPPKPQ PAVLEVCTRG TCRRRGALEL
CDRLQAEAKT CAVEVRTRGC LGRCKQGINV RRSSDNQILS QLSPQAAAEL LSPWRTPAVV
SGTAVG