| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2170 |
|---|
| Symbol | |
|---|
| ID | 3773727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 2251548 |
|---|
| End bp | 2251997 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637800615 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_401187 |
|---|
| Protein GI | 81300979 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.414225 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTTT CCTCGCTATC GGCAGTCCGA GTGGCCGCGC TCCGCAGTGC TTTGGAGCAG
GCAGGGTATC GCCTCACCCC CCAGCGCTAC TGGATTGCAG AGATTTTTGA GGGACTGGCT
CAGGGTGAGC ATCTCAGCGC GATTGATCTG CAGCGTCACC TCAGCGATCG CCAAACCCCC
TTATCCAAAT CCACCATCTA TCGCAGTCTC GAGAGCCTCT GCCATGCCGC TTGGCTGCGC
TGCATCACCT TAGACCGTAA GCAACGTTGC TACGAGTTGA ATCGTGAGGG TACTCACTAC
CACCTCACCT GCCTGCATTG CCAAGCGGTG ATTGAGTTTC TCGACGATCG CGTCATCCAC
CTGAGCGAGG GCATCGCCGA TCGCTACGGC TTTCAACTAC TGAACTGCCA GCTCTTGATC
ATGGGCATTT GCGCTGCTTG TCGCTACTAG
|
|---|
| Protein sequence | MTVSSLSAVR VAALRSALEQ AGYRLTPQRY WIAEIFEGLA QGEHLSAIDL QRHLSDRQTP
LSKSTIYRSL ESLCHAAWLR CITLDRKQRC YELNREGTHY HLTCLHCQAV IEFLDDRVIH
LSEGIADRYG FQLLNCQLLI MGICAACRY
|
|---|
| |