Gene Synpcc7942_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2161 
Symbol 
ID3773718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2243880 
End bp2244536 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID637800606 
Producthypothetical protein 
Protein accessionYP_401178 
Protein GI81300970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0551756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGGCA GTCTCGACTT AGATCAAATT CTGCAAGTCT TAAGTCAAAG TCCTGACTTT 
GGTCTTGAGG CTTGCAGGAA TTTTGCTCAG TTCCTGATTA AGCAAGTCCC AGACTATGCT
GCTGCCCACC AGCTCATACT TTGGTGCGAT CGCAAACAAG CAGCAAAAGC GGAACAGCAA
TCCCTAGATT CTCAAACAAT CAATTGCTAT CGAACTATTG TCACTGAGGA AGAACAACTC
TTCAAAGCCC TTGATCATGT AGTTGTTGAG TCTGGCGAGC CTCTAGAAGG CAATTGTTTT
TACTATCACC TCAGCCTTAA ACCATCTGCA CTGTTGGAAA ACAAGCGGAT AAACTTATTT
TCCTCAGCCA CACAAGCCCA GAAAATATTA GAAATTGGCT TCAATGCTGG CCATAGTGCG
GCTTTAATGC TGCTAGCGAA TCCCAACTCA AATCTATTGG CATTCGATAT TTGTGAACAT
CGTTATACGG AAGGATGTTT TGCCGTTTTA GCTGAGCGTT TCCCTCACCG AATTGACTTA
ATTGCGGGGG ACTCTAATAC AACTCTTCCA CTCTTTCGGC TAGAGCACCC AGCAGTCTAT
TTTGATCTAC TCCACATTGA CGGCTCTCAC TCATGCCTAC CAAACGGCAA CTGCTGA
 
Protein sequence
MSGSLDLDQI LQVLSQSPDF GLEACRNFAQ FLIKQVPDYA AAHQLILWCD RKQAAKAEQQ 
SLDSQTINCY RTIVTEEEQL FKALDHVVVE SGEPLEGNCF YYHLSLKPSA LLENKRINLF
SSATQAQKIL EIGFNAGHSA ALMLLANPNS NLLAFDICEH RYTEGCFAVL AERFPHRIDL
IAGDSNTTLP LFRLEHPAVY FDLLHIDGSH SCLPNGNC