Gene Synpcc7942_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2159 
Symbol 
ID3773716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2241719 
End bp2242651 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content59% 
IMG OID637800604 
Producthypothetical protein 
Protein accessionYP_401176 
Protein GI81300968 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.266466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGA CGCCGACAAC TCCCCAAGTA CGTCAGGGAC AGCTACCGAC CGGTGAGCGC 
TACATCTACG AGATTTGGGG CGATTTAACA ACCGGTCAAA CACCGTTGCT GCTAGTGCAT
CCGGTGGGCG TGGGTCTTTG GCGGCGATTT TGGCAGCGCT TCTGTCAGGC TTGGTGCGCC
CAGAGCGATC GCCCACTGAT CGTGCCGGAT CTGCTGGGCT GCGGCGACAG TGATATGGAT
CAGAAGCCCT ACAGCCCGCA AAATTGGGCT GAGCAACTGG CACATCTGCT CCAGATCGAA
ATTCAGCAGC CCGCGATCGT GGTGGCCCAA GGAGCGTTGA TGCCCGCAGC CGTCGCTCTT
GCTGAAATCC AGCCAGAGTT AGTCCTAGGG CTGGCGTTTT CGGGGCCGCC CGCTTGGCGC
GTGATTGAGC GCAAACAAAC GGCTCAACAG CAGCGGCGGC TCTGGCGACT GTTTTGCTCA
CCCCTAGGCT GGCTCTTTTT TCAGTACGCT CGCACGCCCT TTTTCCTGCG CCGCTTCTCG
CAGCGACAAC TGTTTGCCCG AGCGGAGCAA GTCGATCGCG AATGGATGCA GCTCTTGGCA
GAAGGCAGCC GGAAGAAGGC TTCCCGTCAT GCGGTTTACG CGTTCCTCAG TCGTAATTGG
CAACAGGGCT GGGGCGATCG CCTTGCCAAA ATGACCCAAC CGACGCTGCT GCTCTTTGGC
GAAGGGGCAA GTAGTATCAG CCGCGATGGA TGGAAGGAGG ACGCTCGCGA TCGCCTACAG
GCTTACGCCC AAGTCATGCC CTGCAATCAG GGTCAGATTC TGCCCGGTCG CAACGTTCTT
CCCTACGAAG CCACTGCTGC TTTCATCGCA GCCCTTACAG AGTTCTGCGC CAACTATTTC
ACTCCGCAAC AGTTCAACGA TGCAGTGCAG TAG
 
Protein sequence
MTVTPTTPQV RQGQLPTGER YIYEIWGDLT TGQTPLLLVH PVGVGLWRRF WQRFCQAWCA 
QSDRPLIVPD LLGCGDSDMD QKPYSPQNWA EQLAHLLQIE IQQPAIVVAQ GALMPAAVAL
AEIQPELVLG LAFSGPPAWR VIERKQTAQQ QRRLWRLFCS PLGWLFFQYA RTPFFLRRFS
QRQLFARAEQ VDREWMQLLA EGSRKKASRH AVYAFLSRNW QQGWGDRLAK MTQPTLLLFG
EGASSISRDG WKEDARDRLQ AYAQVMPCNQ GQILPGRNVL PYEATAAFIA ALTEFCANYF
TPQQFNDAVQ