Gene Synpcc7942_2150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2150 
Symbol 
ID3773707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2232979 
End bp2234022 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content46% 
IMG OID637800595 
Productpenicillin V acylase precursor. cysteine peptidase. MEROPS family C59 
Protein accessionYP_401167 
Protein GI81300959 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3049] Penicillin V acylase and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.17622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA CTCTCGGAAT TGCTGCGATC GCCTGTGCTT GCTTTTTATT AGCTTCAGCC 
CCAGTTCAAG CCTGTACAAG GGCCGTCTAT CAAGGGCCTG AAGGCACAAT CATTACGGGG
CGATCGATGG ATTGGAAGGA TGAAATTCCA GCAAATCTAT GGTTGTTTCC CAGAGGGTTA
CAGCGAGATG GAGCAGTGGG ACCTAACTCT GTAACTTGGG TCTCAAAATA TGGCAGTGTT
GTCGCCAGTG CCTTCGATAT TGCCAGTGCA GATGGCATGA ATGAGAAAGG CCTTGTCGCT
AATCTACTTT GGCTCGCTGA GTCGAAGTAT CCAGAGTATA AACCTAGTCA GAAAGGCTTA
TCGGTTGCTG CTTGGGTTCA GTACGTTCTC GATAATTTCG CTACGGTCGA AGAAGCTGTA
AATGCACTGC GATCGGAACC ATTTGTGGTT GTATCCGCTA ACATTCCCGG CACCGACCGC
TTTGCCACAC TACACCTTTC AGTTTCCGAT GCGAAAGGAG ACAATGCCAT CTTTGAATAT
ATCGATGGCA AGCTCGTCAT TCATCACAGC ATGGACTACA CAGTGATGAC GAACTCCCCC
ACCTTTGAAA AGCAGTTGGC ATTAGATGGC TACTGGCAAC AAGTTGGCGG TTTAAATATG
CTGCCAGGAA CAAATCGGGC TGCTGATCGC TTTGTTAGAG CATCTTTTTA TATTGATGCC
ATTCCTAAGA CAACAGATAC TAGGGTCGCT GTTGCAAGTG TCTTTAGTGT AATTCGCAAT
GCATCTGTGC CCTTCGGTAT CTCCTCTGAG GAAGAGCCGA ATATCTCTTC AACTCGCTGG
CGGTCTTTAT CTGACCAGAA AAATTTAGTC TACTACTTTG AGACAACTCT AACACCCAAT
ACTTTCTGGG TTGATCTCAA GAAAGTTGAT TTTAGCGAGA ACCGACCTGT CAAGCGACTA
TTGGCTTCAA ACAATGAAGT CTATGCGGGT GATGCCCTCA ATTCATTCCA GAACGCCAAG
CCATTCGAGT TTGCTGGACT ATAA
 
Protein sequence
MTNTLGIAAI ACACFLLASA PVQACTRAVY QGPEGTIITG RSMDWKDEIP ANLWLFPRGL 
QRDGAVGPNS VTWVSKYGSV VASAFDIASA DGMNEKGLVA NLLWLAESKY PEYKPSQKGL
SVAAWVQYVL DNFATVEEAV NALRSEPFVV VSANIPGTDR FATLHLSVSD AKGDNAIFEY
IDGKLVIHHS MDYTVMTNSP TFEKQLALDG YWQQVGGLNM LPGTNRAADR FVRASFYIDA
IPKTTDTRVA VASVFSVIRN ASVPFGISSE EEPNISSTRW RSLSDQKNLV YYFETTLTPN
TFWVDLKKVD FSENRPVKRL LASNNEVYAG DALNSFQNAK PFEFAGL