Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2142 |
Symbol | |
ID | 3773699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2226468 |
End bp | 2226803 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800587 |
Product | translation initiation factor Sui1 |
Protein accession | YP_401159 |
Protein GI | 81300951 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.183879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.356716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCTCAAA AGAAAAATAG CGATCGCATT GTTTGGCGCG AGTTTGGTAG TCAGGATGCT GCGTTGGAAC GAGGGCAGCC CGATCGCCCG CCCGCTCAGC ATGATCTCCG CATCCAGTGC AGCCGTAAGG GGCGCGGCGG CAAAACCGTG ACGATCATCA CGGGCTTCCA GCATCGGCCA GAAACGCTGG CGAGCCTGTG CAAAAAACTG AAGGCGCGTT GTGGCAGTGG CGGTACCGTT AAGGACGACA CGATCGAGAT TCAGGGCGAC CACCGTCAAA CCCTGCTAGA GGCACTCAAG GGCTTGGGCT ACGGTGCAAA ACTGAGCGGC GGCTGA
|
Protein sequence | MAQKKNSDRI VWREFGSQDA ALERGQPDRP PAQHDLRIQC SRKGRGGKTV TIITGFQHRP ETLASLCKKL KARCGSGGTV KDDTIEIQGD HRQTLLEALK GLGYGAKLSG G
|
| |