Gene Synpcc7942_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2139 
Symbol 
ID3773696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2223602 
End bp2224213 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content40% 
IMG OID637800584 
Productglutathione S-transferase 
Protein accessionYP_401156 
Protein GI81300948 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.041384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGG TTTTCGGAGA TATGTTGTCT GGGAACTGCT ACAAGATCAA ATTACTGATG 
CAATTTATTG ATATGCCCCA TCAATGGGTT CATGTTGACA TACTTGCTAA CGAAACTCAT
ACCAAAGAAT TTAAGCGGAT GAATCCAAAT GCAAGAATAC CAGTCGTAGA GTTGGATGAT
GGCAAGTATC TATGGGAGTC TAATGCAATC TTGAATTACC TTGCGGAAGG AACTGAATTT
CTGCCACAAG AAAAGTATGA AAGGGCTAAA GTCTTACAGT GGCAGTTTTT TGAGCAATAT
AGTCACGAGC CATATATTGC AACAGCAAGA TACATCAATA AGTACTTGGG ATTACCCAAA
GAGCGGGAAG CAGAATATCA CGCGAAGCAA GCTGGTGGGC ATAAGGCTCT TACCGTGATG
GAACAACATT TAGCTGAAAA TAGATTTTTC CTTGGTGTGA ATGCATCCAT TGCTGATATC
AGTTTGTATG CATACACGCA TGTCGCCCAT GAGGGTGGCT TTGATTTGTC AGAGTACAAA
AATATTCAGC GATGGTTCAA AGATTTTGAG AGCATTCCTG GCTACGTAAA AATGGCGAGA
GAAAACGCGT AA
 
Protein sequence
MYKVFGDMLS GNCYKIKLLM QFIDMPHQWV HVDILANETH TKEFKRMNPN ARIPVVELDD 
GKYLWESNAI LNYLAEGTEF LPQEKYERAK VLQWQFFEQY SHEPYIATAR YINKYLGLPK
EREAEYHAKQ AGGHKALTVM EQHLAENRFF LGVNASIADI SLYAYTHVAH EGGFDLSEYK
NIQRWFKDFE SIPGYVKMAR ENA