| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2119 |
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| Symbol | |
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| ID | 3774338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2200097 |
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| End bp | 2201656 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800564 |
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| Product | RNA methyltransferase TrmH, group 3 |
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| Protein accession | YP_401136 |
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| Protein GI | 81300928 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.383182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACT ATTCGGATCG TTCTGACTTT TCTGAACGCC AAGATCGTTC GAGTGACGAT
CGCCCGAACT TCCGCCGTTT TGATCGCGAT CGTCCCAGTG AAGGTCGTCG TTTTGAAGGC
CGCTCAGAGG GCGGATACCG AGGCCGCGAT GATCGCGGCG GCAGTGGCGG CTATCGCCAG
AATCGCGACG ACCGCGGTGG CTTCCGGGGT CGTGATGATC GGGGCGGCTA TCGGGGAGGC
GATCGCGATC GTCCCAGTGA AGGTCGTCGT TTTGAAGGCC GCTCAGAGGG CGGATACCGA
GGCCGCGATG ATCGCGGCGG CAGTGGCGGC TATCGCCAGA ATCGCGACGA CCGTGGTGGC
TTCCGGGGTC GTGATGATCG GGGCGGCTAT CGGGGAGGCG ATCGCGATCG TCCGAGCGAA
GGTCGTCGTT TTGAAGGCCG CTCAGAGGGC GGTTTCCGGG GTCGTGATGA CCGTGGCGGC
AGTGGTGGTT ACCGGGGTCG CGATGATCGC GGTGGCTTCC GAGGTCGTGA CGATCGGGGC
GGTTTCCGGG GCCGTGATGA CCGTGGCAGT AGTGGTAGTT ACCGGGGTCG TGATGATCGT
GGTGGCTTCC GAGGTCGTGA TGACCGACGC GACGATCGTG ATAACTTCCG GCCCAGCCGC
GATCGCGAAT TGAATCGGGA AGTCAACACC AGTCCCGCCG GCGATCAGGA AGCGACCGAT
CATGAATTGA TCTACGGTCG TCATGCTGTC TTGGCTGCCC TCCAAGGCAA CCGGACCCTC
AACCGTATCT GGGTGACGCC GCGTCTGCGC TATGAATCAA CTTTCCTGGA GTTGATTGAC
GCTGCTAAAG CCGGTGGTGC CGTGGTTGAC GAAGTTCCCG TTGAGCGGAT TCGTCAGCTG
ACCGATGGTG CTGTTCACCA AGGAATTGCC GCTCAAGTTG CTCCCTACCC CTACCAAGAA
CTCAGCGATC TCATTGCCCA AGCTAAGGCT GCAACCACAG ATCCCGTGAT TGTGGTTGCC
GATGGGATCA CTGATCCCCA CAACTTGGGT GCCATCATTC GGACCGCAGA AGCCTTGGGC
GCTCACGGTT TGGTGATCCC GCAGCGGCGT GCGGTCGGTG TGACTGCGGC TGTCGCGAAA
GTAGCTGCTG GTGCACTGGA AAGCTTCCCT GTCGCGCGAG TCGTCAACCT CAATCGCGCC
CTCGAAGAGT TGAAGGATGC CGGTTTCTGG ATCTATGGTG CGGCTGGCGA AGCCAAGCAA
TCGATTCATG AGACCAGCTT CAGCGGGCCA GTCGTGCTGG TTGTGGGATC CGAAGATGAA
GGCCTCAGCC TTCTGACTCG AGAGCGCTGC GACCACCTCA TTTCGATTCC GCTCCGTGGC
AAGACGAACA GCCTCAATGC TTCGGTGGCA GCCGGCATGG TGCTGTACGA AGTGAGCCGT
CAACGCCAAC AGCTGACCCA TCATCTTGAG GGGATCGCTG ACAACGGCGC AACAGCGTTG
ACGACGGCAG CAGTTGAGTT TGCTGGAGCT GCGGCTGGCC TTGGGGAACT AGGTCTCTAA
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| Protein sequence | MSDYSDRSDF SERQDRSSDD RPNFRRFDRD RPSEGRRFEG RSEGGYRGRD DRGGSGGYRQ
NRDDRGGFRG RDDRGGYRGG DRDRPSEGRR FEGRSEGGYR GRDDRGGSGG YRQNRDDRGG
FRGRDDRGGY RGGDRDRPSE GRRFEGRSEG GFRGRDDRGG SGGYRGRDDR GGFRGRDDRG
GFRGRDDRGS SGSYRGRDDR GGFRGRDDRR DDRDNFRPSR DRELNREVNT SPAGDQEATD
HELIYGRHAV LAALQGNRTL NRIWVTPRLR YESTFLELID AAKAGGAVVD EVPVERIRQL
TDGAVHQGIA AQVAPYPYQE LSDLIAQAKA ATTDPVIVVA DGITDPHNLG AIIRTAEALG
AHGLVIPQRR AVGVTAAVAK VAAGALESFP VARVVNLNRA LEELKDAGFW IYGAAGEAKQ
SIHETSFSGP VVLVVGSEDE GLSLLTRERC DHLISIPLRG KTNSLNASVA AGMVLYEVSR
QRQQLTHHLE GIADNGATAL TTAAVEFAGA AAGLGELGL
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