| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2096 |
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| Symbol | |
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| ID | 3774315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2177467 |
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| End bp | 2179461 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637800541 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_401113 |
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| Protein GI | 81300905 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.76184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA TTCCGATGTT CGAGCTTGAA GAAGCCATCG ATCGGCAGCC ACTCACAGTT
GCGCCAACTT TGCCGGTTGC TCAGGTTCTG GCAGTGATGG AGCGGCAGCA TTCCAGCTAT
GTGCTGTTGA TGGAATCGAA TCAAACCCTT GTTGGTATTT TCACAGAGCG GGATTTAGTC
CGGCTCACGG CCATCGGAAT CACGATCACT TCAACACCGA TTGAAGAGGT CGCAACTTCG
ACTGTGACGA CGATTCAAGA ATCAGATATT TACGACGTTA TTAGGACACT GAACCTCTTT
CGTCAGTACA ACGTTCGACA TCTGCCGGTC GTCAATGCCA CCCATCAGCT TATTGGCATC
ATGACCTATG AAGGGATTCG GCGGCTATTA AAACCGATCG ATTTACTACG GCTGCGGCGA
GTCTCCGAGG TGATGGTGAA GTCGATCATT TGTGCTGACC GCTATCAATC GGCTTTATCG
CTAGCTAAAT TAATGAGCGA TCGCCTAATT AGTTGTGTTG TCATTACGGA GAAAGATCCT
TCAGGCTTTC CTAAACCGAT TGGCCTAGTC ACTGAACGCG ATATTTTACA TTTGCAAGTT
CAGGGCGCTG ATTTAAGCCA AACAATAGCT GCTGATTTCA TGGGTTCACC GCCAGTTTTT
ATTCAGGCTA GCGATACGCT TTGGCAAGCT AATCAATACA TGAGAGCTCG CAAGATCCGG
CGACTGCTTG TGGTTGACGA GCGCAATATT ATGGTTGGCC TACTCACCCA AACCAGCCTC
ATTCATATGA TCGATCCCGT TGAGGCAACT CTCACGATTG AGACTTTACA GCAGATGGTG
GGAGAGCGAA CAGTTGCGCT AGATGCAGCC AATGAGAAAC TTGAGCGCAA AGCCCTGGAA
CGAAAACGAG CCAAAGCAGC TTTACAACAG CAAATTTATC GCGAACGCTT GGTCAATCGA
ACTGCTCAAC GGATTCGAGA ATCACTACAG CTCGATGAAA TCTTGGTAAC CACTGTTTCA
GAAGTTCGTC AATTCCTCAA AGCTGAACGA GTGCTTATTT ATCGGTTTCA GCCAAATCAG
CAAGGAGCGA TCGCTGCGGA GTCAACTGAC TCTAACCAAA CTCTGATTCA AGGGAACGCC
GAACTTGAAG CAATTCTGCA GGAGATTGAT CCAACTTTCT ATAGTTGCGA TCGGATTCAC
TCCATTCCCG ATCTGCAAGC CCAGGGCTTA GAGCTCACCA ATGCAACCTT GCTCAAACGC
CTCCAACTGC GAGCCAGTCT TGTCGCTCCA ATTTTTGCCC AAGAAATACT GTGGGGACTT
TTAATTGTTG GCCAAAACTC ACAACCTCGT CGCTGGGAAA AGCTAGAGAT TGACCTGCTA
AAGCAATTAG CCACTCAGGT CGGCATTGCG ATCCAGCAAG CCCGTCTTTA TGCTCAACTC
GCTGCCGCCA ATCAACAGCT CTTGCGACTG GCCCAATCTG ATGGACTCAC AGGCTTAGCC
AATCGTCGGC ATTTTGATCA GTGTTTAGAC ATCGAATGGC AGCGGGCAAT ACGAGAGCAG
CATCCCCTAG GATTAATCCT GATTGATATC GATTGCTTTA AGCAATTTAA TGATACCTAC
GGTCACCAAG CTGGAGACGA CTGTCTTAAG GCAGTTGCCA CTGCGCTCAC TCAAGTCATC
GCTCGCCCTG CTGACTTAGT TGCCCGTTAT GGCGGCGAGG AATTTGTGGT GATTTTACCT
AATACGAATG AACAAGGCAT ATTGCAAATT GCAGAATCGA TGCGATCCGC TGTTCAGCAG
CTCAAAATTC CCCATCGAAG TTCATCAGTG TGCTCGTCGG TCAGCCTAAG TTTAGGAGCC
GTCACCTGGG TTCCCACGCC TCATAAGTCA CCTGAAGCAC TGATTGCAGC CGCAGACCAA
GCACTCTACC AAGCGAAAGA ATTAGGACGC AATCGCGTTT GTTTGGCGGG TGTTCGACTC
CTTGAGACGA CGTAG
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| Protein sequence | MTKIPMFELE EAIDRQPLTV APTLPVAQVL AVMERQHSSY VLLMESNQTL VGIFTERDLV
RLTAIGITIT STPIEEVATS TVTTIQESDI YDVIRTLNLF RQYNVRHLPV VNATHQLIGI
MTYEGIRRLL KPIDLLRLRR VSEVMVKSII CADRYQSALS LAKLMSDRLI SCVVITEKDP
SGFPKPIGLV TERDILHLQV QGADLSQTIA ADFMGSPPVF IQASDTLWQA NQYMRARKIR
RLLVVDERNI MVGLLTQTSL IHMIDPVEAT LTIETLQQMV GERTVALDAA NEKLERKALE
RKRAKAALQQ QIYRERLVNR TAQRIRESLQ LDEILVTTVS EVRQFLKAER VLIYRFQPNQ
QGAIAAESTD SNQTLIQGNA ELEAILQEID PTFYSCDRIH SIPDLQAQGL ELTNATLLKR
LQLRASLVAP IFAQEILWGL LIVGQNSQPR RWEKLEIDLL KQLATQVGIA IQQARLYAQL
AAANQQLLRL AQSDGLTGLA NRRHFDQCLD IEWQRAIREQ HPLGLILIDI DCFKQFNDTY
GHQAGDDCLK AVATALTQVI ARPADLVARY GGEEFVVILP NTNEQGILQI AESMRSAVQQ
LKIPHRSSSV CSSVSLSLGA VTWVPTPHKS PEALIAAADQ ALYQAKELGR NRVCLAGVRL
LETT
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