Gene Synpcc7942_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2078 
Symbol 
ID3774297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2155927 
End bp2156565 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content57% 
IMG OID637800523 
Productphosphoglycerate mutase 
Protein accessionYP_401095 
Protein GI81300887 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTAA GACTCTATCT CGTCCGCCAC GGTGAAACGA CCGCTAGCCG TGAAGGCGGC 
TACAGTGGCA GCGGCAATCC GCCGCTGACA GAAGCGGGGC AGCAGATGGC TCAGGCTTTA
GCGGATACCT ATGCTGATTT GAATTGGCAG GCTGCCTATG TCAGCCCGAT GCTACGGGCA
CAAGAAACTG CGCAACCCCT CTGTCAGCAG GCCAAGCTTG ACATGCGGAT TCGCGATGGA
CTGCGTGAGA TCGACTTTGG CATTTGGGAG AACCGCACGC CGGATGAAGT CATGGCCAGT
CATCAGCAGG ACTATCTTCA CTGGCTAGCG GAGCCTGCCT GGAATCCCCC CACGGGTGGC
GAAAGTGCGG TGGTCGTCGC CAGTCGGGTC AGCCTCGTGA TTCAGGAAAT CACTGAGACG
ATCGCCGATG GAAATGTCCT TGTTGTCTCT CACAAAGCAA CCCTGCGGAT TCTGCTTTGT
AACCTCTTGG GGATCGATCT GGGGCGTTAC CGCGATCGCA TTGCTATGCC AGTCGCCTCG
CTCTCCATCC TGTCTTTCAA TCAGCACGGG CCCTGTCTGG AACGCTTGGG CGATCGCAGT
CATCTGCCAC TGGAGTTGCG CGATCGCGCT GGAACTTAA
 
Protein sequence
MVLRLYLVRH GETTASREGG YSGSGNPPLT EAGQQMAQAL ADTYADLNWQ AAYVSPMLRA 
QETAQPLCQQ AKLDMRIRDG LREIDFGIWE NRTPDEVMAS HQQDYLHWLA EPAWNPPTGG
ESAVVVASRV SLVIQEITET IADGNVLVVS HKATLRILLC NLLGIDLGRY RDRIAMPVAS
LSILSFNQHG PCLERLGDRS HLPLELRDRA GT