Gene Synpcc7942_2072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2072 
Symbol 
ID3774291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2149802 
End bp2150425 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content56% 
IMG OID637800517 
Productheat shock protein GrpE 
Protein accessionYP_401089 
Protein GI81300881 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC ATCAGACCCC TCCAGAGGAA GATCTGACTG TGGCCAATGG AGACTCGGCA 
GAGGCAGTGT CGGAGCCTGA TGTCACGGTT GCTTCTGGGC AGGAGGCCGC AGAGTTGGCC
GCTCAATTGG CTTTGGTTGC AGCTGATCGC GATCGCCTCA AGACTGAGTT GGATGAGCAG
AACAGCGCCT ATCTGCGCCT CGCGGCAGAT TTTGAAAATT TCCGGCGTCG AACCTTGAAG
GAACGAGAAG AGCTGGAGCT GCAGAGTAAG CGCACCACGA TTACTGAACT ACTACCGGTG
ATCGACAATT TTGATCGCGC CCGCGCCCAA ATTAAGCCTC AGGGCGAAGA AGCGGAGGCG
ATTCACAAGA GCTACCAAGG GCTCTACAAG CAACTGGTCG ATTGTTTGAA GCGTATCGGC
GTCTCGCCGA TGCGGGCTGA GGGCCAGCCC TTTGATCCCT CATTGCATGA TGCAGTCCTA
CGGGAAGAGA CGACGGAGCA TCCGGATGGC ATCGTGCTCG AGGAGCTACA ACGAGGCTAC
CTCTTGGGCG ATCTCGTCCT GCGCCATGCT CTGGTCAAAG TCTCGATTGC GGCAGAGGAA
AATTCTGCAG CGGTAACAGA ATAA
 
Protein sequence
MSEHQTPPEE DLTVANGDSA EAVSEPDVTV ASGQEAAELA AQLALVAADR DRLKTELDEQ 
NSAYLRLAAD FENFRRRTLK EREELELQSK RTTITELLPV IDNFDRARAQ IKPQGEEAEA
IHKSYQGLYK QLVDCLKRIG VSPMRAEGQP FDPSLHDAVL REETTEHPDG IVLEELQRGY
LLGDLVLRHA LVKVSIAAEE NSAAVTE