Gene Synpcc7942_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2067 
Symbol 
ID3774286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2143337 
End bp2144584 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content59% 
IMG OID637800512 
Producthypothetical protein 
Protein accessionYP_401084 
Protein GI81300876 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACT CTCTTCAGAT TGCCATTGTT GGGGGCGGGG CTGCGGGCTT TTTTGCAGCG 
ATCGCCTGTG CAGAAGCCAA TCCTCACGCC CACATTACGA TCTACGAAGC AGGGCCAGAA
CCGCTGAGCA AGGTGCGGAT TTCGGGGGGA GGCCGCTGTA ATGTCACCCA CCATTGCACC
GAAGCCAGGC AGCTAATTCA GGCTTACCCT CGCGGCGGTC GAGCTTTGCT GGGGCCATTC
AGTCGCTTTC AGCCCCAAGA CACGATTGCT TGGTTTGAAG CTCGCGGCGT CCGCCTGAAA
ACAGAAGCCG ACGGACGGAT GTTTCCGGTC AGCGATCGCT CCAGCAGCAT CATCAACTGC
CTTCTAGGTG AGGCTGAACG CTTGGGCATT CAGCTGCGCT TACGGGAACC GATCATTGGG
GTCGAGCGCC ATGCAGACGG GTTTCAGCTA CAGCTGCGAG CAGCAACTGT CACAGTCGAT
CGCCTCTTGC TAGCAACCGG CAGCAGCCCC AGTGGCTATC GCTTAGCAAC AGCGCTGGGA
CATGACCTGA TCCCGCCAGT TCCTTCTCTG TTCACCTTTA CGGTGCTGGA TGCGAGCCTG
CGCGCTCTGG CGGGGATCAG TCGCGATCGC GTTCAGGCCA CCCTACAAGT CGGCGGCGAT
CGCCTCAAGG AGACAGGACC TCTCCTGATT ACCCACTGGG GCTTGAGCGG CCCAGCAGTC
CTCAAGCTCT CGGCCTTTGG GGCAAGGTTG CTCCAACAGC ATCGCTATAG CGCAGAGCTG
CGGATCAACT GGCTACCCGA TCGCTCGGCG GAACAAGTTC GGCTCGAGCT CCAGGCCATG
CGCAGCAACG AGAGCAAACG TCAGCTTAAA AATGGGCGAC TGGCCGATCT GCCCCAGCGC
CTCTGGCTCT ATCTGCTAGA GCAGGCAGGT CTTCCCAGTG ATCGTCGTTG GGGGGAAGTC
TCTAATCAGC AATTGACAGC GCTCTGGCAA ACCTTGACCG CCGGTACCTA CGCGATCGCG
GGCAAAGGTG TTTTCAAAGA AGAATTTGTC ACCGCTGGCG GTGTCCCTCT CGACAGCCTC
AATAGTCAAC GCATGGAAAG TAAACGCTGC CCGGGGCTCT TCGTGGCGGG CGAGCTGCTC
AACGTCGATG GCATCACCGG CGGCTTTAAT TTTCAAAATG CCTGGACCAG TGGCTGGATC
GCCGGCCAAG CCCTAGCTGA TCACAGGAGT GAGGCTCATC TCCGGTAG
 
Protein sequence
MEDSLQIAIV GGGAAGFFAA IACAEANPHA HITIYEAGPE PLSKVRISGG GRCNVTHHCT 
EARQLIQAYP RGGRALLGPF SRFQPQDTIA WFEARGVRLK TEADGRMFPV SDRSSSIINC
LLGEAERLGI QLRLREPIIG VERHADGFQL QLRAATVTVD RLLLATGSSP SGYRLATALG
HDLIPPVPSL FTFTVLDASL RALAGISRDR VQATLQVGGD RLKETGPLLI THWGLSGPAV
LKLSAFGARL LQQHRYSAEL RINWLPDRSA EQVRLELQAM RSNESKRQLK NGRLADLPQR
LWLYLLEQAG LPSDRRWGEV SNQQLTALWQ TLTAGTYAIA GKGVFKEEFV TAGGVPLDSL
NSQRMESKRC PGLFVAGELL NVDGITGGFN FQNAWTSGWI AGQALADHRS EAHLR