Gene Synpcc7942_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2057 
Symbol 
ID3774276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2135125 
End bp2135757 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID637800502 
Productmembrane protein 
Protein accessionYP_401074 
Protein GI81300866 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA GTGTTGTCGC GATCGCGCTG CTTGCCTACC TTTTGGGCTC CTTCCCAGCA 
GGCTATCTGG CTGGCCGCTG GCTCAAGGGC ATTGACATTC GCAAGGAAGG ATCTGGTTCG
ACTGGAGCCA CCAATGTCCT ACGGGTGCTG GGCAAGGGTC CAGCCTTGGT GGTGTTCATC
ACCGACATTC TCAAGGGTGT CCTGGCAGTT GTTGCGGCAC GGGCGATCGC CTCTACCAAT
GGACTCGATC CGAGTGCGAT CGCTTGGCTT GCTGCCTTTG CCGCGATCAT TGCTGTCGTC
GGTCACAGCC TGCCGGTTTG GCTCAGTTTT CGGGGTGGCA AATCTGTTGC CACTAGCTTA
GGCGTACTCC TCGCCTTATC GCCCGTGGTT GGGCTGTCAG GATTCGGCGC TTTCCTCCTG
CTCCTAGCCC TATTTCGGAT TGTCTCGCTT GGCTCGATCG CCGGGGCCAT TACTGTCATC
GTCTTGATGC TGATCTTGCC GGAACCCCTA CCAAACAAGA TTCTGGGTAT CGCTTCTGGG
ATTTACGTGA TCTACCGGCA CCGGAGCAAC CTCGATCGCC TACGGCGGGG TGAAGAACCC
CGCATTGGAC AACGGCTATC AACCAATCGT TAA
 
Protein sequence
MLLSVVAIAL LAYLLGSFPA GYLAGRWLKG IDIRKEGSGS TGATNVLRVL GKGPALVVFI 
TDILKGVLAV VAARAIASTN GLDPSAIAWL AAFAAIIAVV GHSLPVWLSF RGGKSVATSL
GVLLALSPVV GLSGFGAFLL LLALFRIVSL GSIAGAITVI VLMLILPEPL PNKILGIASG
IYVIYRHRSN LDRLRRGEEP RIGQRLSTNR