| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2048 |
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| Symbol | psaB |
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| ID | 3774267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2121521 |
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| End bp | 2123725 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800493 |
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| Product | photosystem I P700 chlorophyll a apoprotein A2 |
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| Protein accession | YP_401065 |
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| Protein GI | 81300857 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.55767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCA AGTTTCCTAA ATTCAGCCAA GACCTCGCTC AGGATCCGAC AACACGTCGG
ATTTGGTACG GGATTGCTAC CGCCCATGAC TTTGAAAGTC ATGACGGCAT GACCGAGGAA
AATCTTTACC AAAAGATTTT CGCCTCGCAC TTTGGACACC TCGCAATCAT CTTCTTGTGG
GTGTCTGGCA ACCTGTTCCA CGTCGCCTGG CAAGGTAACT TCGAGCAGTG GAGCCAAGAT
CCGCTCCATG TTCGCCCAAT CGCCCACGCG ATTTGGGATC CCCACTTTGG TCAAGGGGCG
ATCGACGCCT TTACCCAAGC GGGTGCTTCT TCTCCGGTGA ACGTCGCCTA CTCGGGCGTC
TACCACTGGT GGTACACCAT TGGCATGCGC ACCAATGGTG ACCTCTACCA AGGCTCAATC
TTCCTTTTGA TCCTGTCTGC GCTCTTCCTG TTTGCTGGTT GGCTGCACTT GCAGCCCAAG
TTCCGCCCCA GCCTCAGCTG GTTCAAGAAC GCCGAATCGC GCCTCAACCA CCACTTGGCA
GGTCTGTTCG GCTTCAGCTC GCTGGCTTGG ACGGGTCACT TGGTGCACGT CGCCATCCCT
GAAGCGCGTG GCCAACATGT GGGCTGGGAT AACTTCCTGT CCACCCTGCC TCACCCGGCT
GGTTTGGCTC CGTTCTTCAC CGGTAACTGG AGCGTTTACG CCGAGAATCC GGACACCGCT
AGCCATGCCT TTGGTACGGC TGAAGGTGCG GGTACCGCAA TCCTGACCTT CCTGGGTGGC
TTCCATCCGC AAACGGAAGC GCTCTGGCTA ACGGACATTG CCCACCACCA CCTGGCGATC
GCAGTGATCT TCATCATTGC GGGCCACATG TACCGGACTA ACTTTGGTAT CGGCCACAGC
ATCAAAGAGA TCTTGGAAGC CCACAAACCC CCGGCTGGTG GTTTGGGTGC AGGCCACAAA
GGTCTCTACG AAACGCTGAA CAACTCGCTG CACTTCCAAC TGGCGCTTGC GCTGGCTTCG
CTGGGTGTGG TCACCTCACT GGTGGCTCAA CACATGTACT CCATGCCCCC GTATGCCTTC
ATCGCGAAGG ACTATACGAC CATGGCTGCG CTGTACACCC ACCACCAGTA CATCGCGACC
TTCATCATGT GCGGTGCGTT TGCCCACGGT GCGATCTTCT TGATCCGCGA CTATGACCCT
GAGGCAAACA AAAACAACGT CTTGGCTCGC GTTCTGGAGC ACAAAGAAGC GATCATCAGC
CACCTGAGCT GGGTCTCGCT CTTCCTGGGC TTCCACACTC TTGGCCTCTA CGTTCACAAC
GACGTGGTCG TTGCTTTCGG AACTCCCGAA AAACAAATCC TGATCGAGCC GGTCTTCGCG
CAGTTTGTGC AAGCGGCTTC GGGTAAAGCG CTCTACGGCT TCAACGTGCT GCTGGCGAAT
GCCGACAGTG CTGCGACGGC TGCAAGCCTG GGCACCTACC TGCCCAACTG GCTGGATGCT
ATTAACTCCG GCAAAACCGC TCTCTTCCTG CCGATCGGCC CTGGCGATTT CCTGGTTCAC
CATGCGATCG CTCTCGGCCT GCACACCACC ACCTTGATTC TGGTCAAAGG TGCTTTGGAT
GCCCGTGGCT CCAAACTGAT GCCGGACAAG AAAGACTTCG GTTACAGCTT CCCTTGCGAC
GGTCCTGGCC GTGGCGGCAC CTGCGACATC TCGGCGTGGG ACGCTTTCTA CCTGGCTGTC
TTCTGGGCGC TGAACACCGT TGGCTGGGTG ACCTTCTACT GGCACTGGAA AAACCTGACC
GTTTGGCAGG GCAATGTGGC TCAGTTCAAT GAGTCCAGCA CCTACCTGAT GGGCTGGTTG
CGCGACTACC TCTGGTTGAA CAGCTCGCAG CTGATCAACG GCTACAACCC CTTCGGCACG
AACAACCTGT CTGTCTGGTC TTGGATGTTC CTCTTCGGCC ACCTGATCTG GGCAACTGGT
TTCATGTTCC TGATCTCTTG GCGGGGTTAC TGGCAAGAGC TGATCGAAAC CATCGTCTGG
GCGCACCAAC GCACCCCGCT GGCCAACATC GTTGGCTGGA AAGACAAGCC GGTGGCTCTG
TCGATTGTTC AAGCCCGTGT GGTTGGCTTG GCTCACTTCA CGGTGGGTTA CTTCCTAACC
TATGCGGCCT TCTTGATTGC TTCCACAGCC GGCAAGTTCG GTTGA
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| Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FESHDGMTEE NLYQKIFASH FGHLAIIFLW
VSGNLFHVAW QGNFEQWSQD PLHVRPIAHA IWDPHFGQGA IDAFTQAGAS SPVNVAYSGV
YHWWYTIGMR TNGDLYQGSI FLLILSALFL FAGWLHLQPK FRPSLSWFKN AESRLNHHLA
GLFGFSSLAW TGHLVHVAIP EARGQHVGWD NFLSTLPHPA GLAPFFTGNW SVYAENPDTA
SHAFGTAEGA GTAILTFLGG FHPQTEALWL TDIAHHHLAI AVIFIIAGHM YRTNFGIGHS
IKEILEAHKP PAGGLGAGHK GLYETLNNSL HFQLALALAS LGVVTSLVAQ HMYSMPPYAF
IAKDYTTMAA LYTHHQYIAT FIMCGAFAHG AIFLIRDYDP EANKNNVLAR VLEHKEAIIS
HLSWVSLFLG FHTLGLYVHN DVVVAFGTPE KQILIEPVFA QFVQAASGKA LYGFNVLLAN
ADSAATAASL GTYLPNWLDA INSGKTALFL PIGPGDFLVH HAIALGLHTT TLILVKGALD
ARGSKLMPDK KDFGYSFPCD GPGRGGTCDI SAWDAFYLAV FWALNTVGWV TFYWHWKNLT
VWQGNVAQFN ESSTYLMGWL RDYLWLNSSQ LINGYNPFGT NNLSVWSWMF LFGHLIWATG
FMFLISWRGY WQELIETIVW AHQRTPLANI VGWKDKPVAL SIVQARVVGL AHFTVGYFLT
YAAFLIASTA GKFG
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