| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2047 |
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| Symbol | |
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| ID | 3774266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2118510 |
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| End bp | 2121371 |
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| Gene Length | 2862 bp |
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| Protein Length | 953 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637800492 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_401064 |
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| Protein GI | 81300856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTT CGCCCCACAA CTTTGCTCAG CGGCATCTCG GGCCACGGCC GGCCGATGTC
GAGCAGATGT TGCAGAAGTT AGGTTGCGAG AGCCTAGAAG ACTTGCTGGC GGCGGTAGTC
CCTGCAGATA TTCGTTTGCC ACGATCGCTG AATTTGCCTG AGCCCTGCAG TGAGGCCGAA
GCGCTGGCGG AATTGCGAGC GATCGCCCAT CAAAATCAGA TCCTGCGCTC CTATCTTGGC
CAAGGCTATG CCAACTGCCT GACGCCGCCT GTAATTCAGC GTAATATTCT CGAAAATCCG
GGCTGGTACA CCGCCTACAC GCCCTACCAA GCCGAGATTG CCCAAGGACG CTTGGAAGCA
CTGCTCAACT TCCAGACCAT GGTCAGCGAT CTGACGGGGC TGGAGATCGC CAACGCCTCC
CTGTTGGATG AGGCAACAGC GGCAGCCGAA GCGATGACCC TCAGTTTGGC AGTCGCGAAG
TCAAAGTCTC AGACCTACTT CGTTGCCCAC AACTGCCATC CGCAAACGAT CGCGGTGGTA
CAGACTCGGG CTGCTGCACT GGGGATTGAA GTGCTCGTCG CAGATCTGCT GCAGTTTGAC
TTCCAGACGC CGATTTTTGG ACTGCTGCTG CAATATCCCG CCACCGACGG CACGATCGCA
GATTACCGCT CGGTGATTGA GCAAGCCCAT GCTCAGGGCG CGATCGCAAC CGTTGCCTGC
GACTTGCTAG CACTAACCCT GCTGACCCCT CCAGGGGAAT TTGGCGCGGA TATCGCGGTT
GGGAATAGTC AGCGGTTCGG CGTGCCCCTC GGTTACGGCG GTCCTCATGC GGCATTCTTT
GCCACCAAGG AAGCCTACAA ACGGCAGATT CCGGGGCGGA TTGTCGGTGT CTCTAAGGAT
GCCCAAGGTC AACCAGCACT GCGCTTGGCG TTGCAGACGC GGGAGCAACA TATTCGTCGC
GACAAGGCCA CGAGCAATAT CTGCACGGCG CAGGTCTTGC TGGCTGTGGT GGCTGGCTTC
TACGCGGTCT ACCACGGGGC AGAAGGACTG ACCGCGATCG CGAGGCAAGT GCGTCGCCAG
ACTCAGATCT TGGCGGAGGA GTTGCAGTCT CTCGGATTCA AGATTCCTCA GCAGCCGGGC
TTTGACACGC TGATCGTTGA GGTCGAAGAC CCGAAAGTTT GGCAGTCGCG AACTGAAGCA
GCGGGTTTTA ATCTGCGTTG TCTGAGCGAT CGCCAGCTTG GTATCAGCCT CGATGAAACG
ACGACTGACA GCGATCTCCT CGACCTGCTC ACTGTTTTTG CTCAAGGGCG ATCGTTGCCA
GCTTGGGAGG ATCTACAAGC GGCTGTGACT GACGAAGTGG ATCCAGCCTT CGCCCGCCAA
ACGCCCTTCC TGACCCATCC CGTCTTTCAG CAGTACCACT CGGAAACCGA GTTGCTGCGC
TATATCCATC GCCTCCAGAG TCGTGATCTA TCGCTGACTA CAGCGATGAT TCCGCTCGGC
TCCTGCACGA TGAAGCTCAA CGCCACGGCG GAGATGCTAC CGATCAGTTG GCCGGAGTTT
AATCAGATTC ACCCCTTTGC ACCGCTGAGT CAAACCCAGG GTTATCAACA GCTGTTCCAG
CAGCTTGAGT CTTGGCTAGC CGAAATTACG GGCTTCGCAG CGGTCTCCCT ACAACCCAAT
GCTGGCTCTC AAGGGGAATA TGCGGGTCTA CTCGTCATCC AGCGCTACCA CCAGAGTCGC
GGCGAAGATC ACCGCCAGAT TTGCCTGATT CCGCAGTCGG CTCACGGGAC TAATCCCGCC
AGCGCGGTGA TGGCTGGCAT GAAAGTCGTG CCGATCGCCT GTGACGATCG CGGCAACATT
GATGTCAGTG ACCTGCAGCA AAAAGCTGCC CAGTATGCGG ATCAGCTCGC AGCACTGATG
GTCACCTATC CCTCTACTCA CGGCGTCTTT GAGGAAGCGA TCGCGGAGAT CTGTGCGATC
GTTCATCAGC AGGGCGGCCA AGTTTATTTA GATGGTGCCA ATCTCAACGC CCAAGTCGGC
CTCTGTCAGC CCGCCCAATT TGGGGCGGAT GTCTGTCATC TCAACCTCCA CAAGACCTTT
TGCATTCCCC ACGGCGGTGG TGGCCCCGGC GTTGGCCCGA TCGGTGTTGC CGCGCACCTT
GCGCCCTTCC TGCCGAGTCA TCCGCTCGTC CCAGAAGCGA ATGCCGATCC GCAAGCCCTT
GGCCCGATCG CAGCCGCCCC TTGGGGGAGT GCCAGCATCC TGCCCATTTC TTGGATGTAT
ATCCGCATGA TGGGTGCAGC TGGGTTGACG CAAGCCAGCG CAATCGCAAT TCTCAACGCC
AACTACATTG CCACACGACT AGCGCCCTAC TATCCAATCC TCTATCGGGG CGATCGCGGC
TTTGTTGCCC ACGAATGTAT CCTTGACCTA CGACCGCTCA AACGCACAGC CGGGATTGAA
GTCGAGGATG TCGCCAAACG GCTGATGGAC TACGGCTTTC ATGCGCCAAC CATGTCTTGG
CCCGTGCTCG GCACGTTGAT GGTCGAGCCA ACCGAGAGTG AATCGCTGGC AGAACTCGAT
CGCTTCTGTG AAGCGATGAT CGGCATTTAT CACGAGGTGG ACGCGATCGC CAGCGGTGAC
TTGGATCCCC TCGACAATCC CCTCAAGCAT GCGCCCCACC CGGCAGATGT GCTGCTCCAG
TCTGACTGGA ATCGCGCCTA CAGCCGCGAG CAGGCCGCTT ATCCTGCCCC TTGGACGCGA
GAACACAAAT TCTGGCCAGT GGTCAGCCGC ATCGATAACG CCTACGGCGA TCGCAATCTC
GTCTGCTCCT GTCTACCCAT GAGCGCCTAC AGCGATCGCT GA
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| Protein sequence | MSASPHNFAQ RHLGPRPADV EQMLQKLGCE SLEDLLAAVV PADIRLPRSL NLPEPCSEAE
ALAELRAIAH QNQILRSYLG QGYANCLTPP VIQRNILENP GWYTAYTPYQ AEIAQGRLEA
LLNFQTMVSD LTGLEIANAS LLDEATAAAE AMTLSLAVAK SKSQTYFVAH NCHPQTIAVV
QTRAAALGIE VLVADLLQFD FQTPIFGLLL QYPATDGTIA DYRSVIEQAH AQGAIATVAC
DLLALTLLTP PGEFGADIAV GNSQRFGVPL GYGGPHAAFF ATKEAYKRQI PGRIVGVSKD
AQGQPALRLA LQTREQHIRR DKATSNICTA QVLLAVVAGF YAVYHGAEGL TAIARQVRRQ
TQILAEELQS LGFKIPQQPG FDTLIVEVED PKVWQSRTEA AGFNLRCLSD RQLGISLDET
TTDSDLLDLL TVFAQGRSLP AWEDLQAAVT DEVDPAFARQ TPFLTHPVFQ QYHSETELLR
YIHRLQSRDL SLTTAMIPLG SCTMKLNATA EMLPISWPEF NQIHPFAPLS QTQGYQQLFQ
QLESWLAEIT GFAAVSLQPN AGSQGEYAGL LVIQRYHQSR GEDHRQICLI PQSAHGTNPA
SAVMAGMKVV PIACDDRGNI DVSDLQQKAA QYADQLAALM VTYPSTHGVF EEAIAEICAI
VHQQGGQVYL DGANLNAQVG LCQPAQFGAD VCHLNLHKTF CIPHGGGGPG VGPIGVAAHL
APFLPSHPLV PEANADPQAL GPIAAAPWGS ASILPISWMY IRMMGAAGLT QASAIAILNA
NYIATRLAPY YPILYRGDRG FVAHECILDL RPLKRTAGIE VEDVAKRLMD YGFHAPTMSW
PVLGTLMVEP TESESLAELD RFCEAMIGIY HEVDAIASGD LDPLDNPLKH APHPADVLLQ
SDWNRAYSRE QAAYPAPWTR EHKFWPVVSR IDNAYGDRNL VCSCLPMSAY SDR
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