Gene Synpcc7942_2043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2043 
Symbol 
ID3774262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2112253 
End bp2112672 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content55% 
IMG OID637800488 
ProductS-adenosylmethionine decarboxylase proenzyme 
Protein accessionYP_401060 
Protein GI81300852 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTT CCCTCAATCC CCTCTTGGCT GATCCCCCTG CACTCGGTGT TGGACGGCAC 
TGCATTCTTG AGATTTACGG CTGTGCCGGT GAACTGCTCA ACGATGCTGC CTACGTCGAT
CGTTCGATTC GGGAAGCCGC GATCGCTGCT GGAGCAACTC TCCTCAATCA GGTCTGCCAT
GAGTTTGAAC CTCAGGGCGT GACGGCTCTA GCGTTGCTGG CTGAATCCCA TATTTCCATC
CACACCTGGC CTGAAAATGG CTATGCGGCA GTGGATGTCT TTACCTGCGG CGACCATACT
CAACCTGAAG TCGCTTGCCA CCATCTCATT CAAGCTTTTA AAGCTGAACA TCATAGTCTG
CACAGCATTG TCAGACGGCC TCCCGCTGCG ATTCGCGAAC ACGAGCGCGT TCCGGCCTAG
 
Protein sequence
MTVSLNPLLA DPPALGVGRH CILEIYGCAG ELLNDAAYVD RSIREAAIAA GATLLNQVCH 
EFEPQGVTAL ALLAESHISI HTWPENGYAA VDVFTCGDHT QPEVACHHLI QAFKAEHHSL
HSIVRRPPAA IREHERVPA