Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2038 |
Symbol | |
ID | 3774257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2107367 |
End bp | 2108059 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637800483 |
Product | transcriptional regulator |
Protein accession | YP_401055 |
Protein GI | 81300847 |
COG category | [K] Transcription |
COG ID | [COG1395] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.547476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCGG CGGACGCTGA GTTTCAGAAT TCAAGCGCTT CTGCAGAGGC AAGTAATGCT CTTTGCCGGT ATCTTGGCAA TACCATTCGT GAATTGCGGC AGCGCCACGA TTTGACGATT GCAGAGGTCT CTCAGAAGGC TGGAATTTCG CGTGGAATGC TGTCAAAAAT TGAGAATGCT CAAACGTCAG CAAGCTTAGA AACTTTAGAG AGGCTTGTCT CAGTCTTGGG AGTCTCTCTG AGTGCTCTTT TTAAGGGCTA TGAAGCCTCT TCTGAACAGG TTTTTTTGGT TCCAGAGGGC ACTGCCAAAG AAGTTGTTCG ACGTGGCACC CGCAACGGCC ATACTTATCA GCTTTTAGCG AGTGATCCAA CTGCTCAGTT TTGCTTTGAA TCGTTTTTGA TTACACTTCA TGAACGATCA GAGCCGTTTG CTGCTTTTGA ACACCCGGGA TTTGAGTCGA TCTATGTTCT AGAAGGGAAA ATGCAGTATC GCCATGGCAG CCAGTCTTAC TTGTTAAAAG CGGGTGATGC TCTGACTTTC CAAAGTGATA TTCCTCATGG CCCTGAGCTG CTGATTGATC TGCCGATTCG GTTTTTGGCA ACAGTTTTTA ATTCGAAAGG GCCGATTCCT GACTTCATTG CTTCACCTTC CGTTGAGATT AGTGAAGTGG AAAGCTCAGA AGATGTGGAA TAA
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Protein sequence | MESADAEFQN SSASAEASNA LCRYLGNTIR ELRQRHDLTI AEVSQKAGIS RGMLSKIENA QTSASLETLE RLVSVLGVSL SALFKGYEAS SEQVFLVPEG TAKEVVRRGT RNGHTYQLLA SDPTAQFCFE SFLITLHERS EPFAAFEHPG FESIYVLEGK MQYRHGSQSY LLKAGDALTF QSDIPHGPEL LIDLPIRFLA TVFNSKGPIP DFIASPSVEI SEVESSEDVE
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