| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2035 |
|---|
| Symbol | |
|---|
| ID | 3774254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2104481 |
|---|
| End bp | 2105518 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637800480 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_401052 |
|---|
| Protein GI | 81300844 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTCA AGAACTACTG GTATCCCGTG GCGCTGGCTC AGAAGGTCGG CGATCGCCCC
CTGTCTGTCA CTCTCTGCGG TGAAGCGATC GCCCTCTACC GCGACAGTGC GGGTCAAATT
CACGCCTTGA GCGATCGCTG TGTGCATCGG GGTGCAGCAC TTTCCGGCGG CTGGGTTGAA
AATGACTGTC TCGTCTGTCC GTACCACGGT TGGCAGTACG ACGCCCAAGG GCACTGCCGC
AAAATTCCTG CCAATACGGA GCAACAGCGC ATTCCCTTTG CAGCCAAAGT TCCCCACTAT
GATGCGATCG AACGCTACGG CCTAGTCTGG CTGTTCTACG GCGATCTACC TGAAGCGGAT
CGTCCACCCT TGCCGCCCTT GCCGGAATAC GACGATCCAG CCTGGCGCAC CGTGCAGGGT
GAAGTGACCT ACACCACCCA CTACACCCGC GTCACCGAAA ACCTGATGGA TTTCGCCCAT
GCACCCTTCA CCCACTCGGG TTCGTTTGGG GCAGCGTCCG ATCCATTAAT TGAGCCTTAC
AAAGTCGAAC AACTTCCAGA CGGTCTACGC GCCCAAACCC AGTTCACCAA ATCGGCCTAT
CGCGGCATTT GGAAGCTGTT CAATCGTGGC GATGCCCCAC GTACCGTCAC CACCACAATC
ACCCTTTACA TGCCCTGCAT CGTCCGCACC GAAACGGACT TAGGCAACGG CTTCCGCTTC
ATTGGCTACG GTGCCAATCT GCCGATCGAT GCCGAGACCA CCAAGACCTT TTGGCTGACC
GTGCGCACCT TCTTTACCGG TGCTTGGGCG GATGGCGACA CGGTGCGCCG CAGTCTCAAA
ATCATCGAAG AGGACAAACG GATCGTCGAA ACCCAGCGTC CCAAGATGAT TCCCTTGGAC
GATCGCAGTG AAACCCACGT CGCCGCTGAT GCCCTACAAA TCGGCTACCG CAACTTGCTG
CGACAAGCCC GCGATCGCGG TTGGGCAATT GCCGAATCTC AGCCAGCCGA TCAGGAACTG
GTGCCCGCCG CTAAGTAG
|
|---|
| Protein sequence | MFLKNYWYPV ALAQKVGDRP LSVTLCGEAI ALYRDSAGQI HALSDRCVHR GAALSGGWVE
NDCLVCPYHG WQYDAQGHCR KIPANTEQQR IPFAAKVPHY DAIERYGLVW LFYGDLPEAD
RPPLPPLPEY DDPAWRTVQG EVTYTTHYTR VTENLMDFAH APFTHSGSFG AASDPLIEPY
KVEQLPDGLR AQTQFTKSAY RGIWKLFNRG DAPRTVTTTI TLYMPCIVRT ETDLGNGFRF
IGYGANLPID AETTKTFWLT VRTFFTGAWA DGDTVRRSLK IIEEDKRIVE TQRPKMIPLD
DRSETHVAAD ALQIGYRNLL RQARDRGWAI AESQPADQEL VPAAK
|
|---|
| |