Gene Synpcc7942_2033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2033 
Symbol 
ID3774220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2102330 
End bp2103022 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID637800478 
Producthypothetical protein 
Protein accessionYP_401050 
Protein GI81300842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.848941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT CGGTCTCCAC TTCAGTTTGT GTTTACGGCC GGACCCTGGC CCAGTACGAG 
CAAATTTTTG ACTTTCAGGC GACGGACTGG CAGGGCGATC GCATCCTCGA CTGCTCGGGC
GGGCCTGCCT CGTTTGTATC GGAGGCCAAT GCACTCGGAA TCGCAGCGAT CGGAGTCGAT
CCGGCCTATG ACCCCGATCT GGAAGTCGTG CGGCAGCGGA TCGAGGCCGA TATCGATACG
GTTGTGCAGC TATTCCCGAT CATCTCGGCC CAGTTGGGCG ATGCGGCACC AGATCCTGCC
TTGGTGGAAG GCTCGGCACG TCAGGCAGCA GCTGGATTTC TTGCGGATTT TGAAGCCAAT
CGCGATCGCT ACATTCAAGC GGCACTGCCG GTCTTGCCTT TCGACGATCG CCAGTTCGAT
CGCGTCCTCT GCGGCAACTT CCTGTTCATC TACGCCAGCG ATGACGGTTT TAACTATCCC
TTCCACTACC AATCGGTGCT GGAGCTCTAT CGGGTTTGCG ATCGCGAGGT GCGCATTTCC
CCGACGCGGG GCAGTGGCGG CGGCAGCCAT GCCTACGTGG CACAGCTGCT GAGCGATCTG
ACGGCAGCGG GAATTCCGGC GGAACTGAAA GCGGTGCGAG ATCCGGTCTA TGGCGAAACG
CAAATGCTGC TGTTAACTCG TCCAGCGGCG TAA
 
Protein sequence
MADSVSTSVC VYGRTLAQYE QIFDFQATDW QGDRILDCSG GPASFVSEAN ALGIAAIGVD 
PAYDPDLEVV RQRIEADIDT VVQLFPIISA QLGDAAPDPA LVEGSARQAA AGFLADFEAN
RDRYIQAALP VLPFDDRQFD RVLCGNFLFI YASDDGFNYP FHYQSVLELY RVCDREVRIS
PTRGSGGGSH AYVAQLLSDL TAAGIPAELK AVRDPVYGET QMLLLTRPAA