Gene Synpcc7942_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2029 
Symbolpgi 
ID3774216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2097799 
End bp2099385 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content59% 
IMG OID637800474 
Productglucose-6-phosphate isomerase 
Protein accessionYP_401046 
Protein GI81300838 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.624784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.632336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC AGCAGCTCTG GCAACGCTAC CTCGATTGGC TCTACTACGA TCCCTCGCTG 
GAGTTTTACC TCGACATCAG CCGCATGGGA TTCGATGACG CTTTCGTTAC TAGCATGCAG
CCCAAGTTCC AGCACGCCTT TGCGGCGATG GCAGAGCTCG AGGCCGGAGC GATCGCCAAC
CCCGATGAAC AGCGGATGGT CGGCCACTAC TGGCTGCGCG ATCCTGAGCT GGCACCCACA
CCGGAGCTGC AGACCCAAAT TCGCGACACG CTGGCCGCGA TCCAAGACTT CGCCCTCAAA
GTACACAGTG GCGTGTTGCG GCCACCCACC GGCTCCCGCT TCACCGACAT TCTCTCAATT
GGCATTGGCG GGTCGGCCCT AGGGCCGCAG TTTGTCTCAG AAGCCCTCCG GCCTCAAGCG
GCACTGCTCC AGATTCACTT CTTTGACAAC ACCGATCCAG CTGGCTTCGA TCGCGTTTTA
GCTGATCTCG GCGATCGCCT TGCTTCCACC TTAGTAATCG TTATTTCCAA ATCTGGCGGC
ACTCCCGAAA CCCGCAACGG CATGCTGGAG GTTCAGTCCG CCTTTGCCCA GCGAGGGATT
GCCTTTGCGC CCCAAGCTGT CGCCGTCACA GGGGTGGGGA GCCATCTCGA TCATGTAGCG
ATCACAGAAA GATGGCTGGC CCGTTTCCCC ATGGAAGACT GGGTGGGCGG CCGCACCTCT
GAACTATCTG CAGTCGGTCT ACTCTCGGCA GCCCTACTGG GCATCGACAT CACCGCCATG
CTGGCCGGGG CGCGGCAAAT GGACGCCCTG ACCCGCCATT CCGATTTGCG ACAAAATCCG
GCAGCGCTCT TGGCTTTGAG CTGGTACTGG GCCGGCAATG GGCAAGGCAA AAAAGACATG
GTCATCCTGC CCTACAAGGA CAGCCTGCTG CTGTTTAGCC GCTATCTGCA GCAGTTGATC
ATGGAGTCAC TGGGCAAGGA GCGCGATCTG CTCGGCAAGG TAGTTCACCA AGGCATCGCC
GTTTACGGCA ACAAAGGCTC GACCGATCAA CATGCCTACG TCCAGCAACT GCGCGAGGGC
ATTCCTAACT TCTTTGCCAC GTTTATCGAG GTGCTCGAAG ACCGACAGGG GCCGTCGCCA
GTCGTGGAGC CTGGCATCAC CAGTGGCGAC TATCTCAGCG GGCTGCTTCA AGGCACCCGC
GCGGCGCTTT ACGAAAATGG GCGTGAGTCG ATCACGATTA CGGTGCCGCG CGTTGATGCA
CAACAGGTGG GGGCCTTGAT CGCGCTGTAT GAACGGGCGG TGGGACTCTA TGCCAGCTTG
GTTGGCATCA ATGCCTATCA CCAGCCGGGG GTGGAAGCCG GCAAAAAGGC TGCTGCCGGT
GTTCTCGAGA TCCAGCGCCA GATTGTGGAG TTGCTCCAAC AGGGACAACC ACTCTCGATC
GCAGCGATCG CAGACGATTT AGGTCAGAGT GAGCAGATTG AAACGATCTA CAAAATCCTG
CGCCATCTCG AAGCCAATCA ACGCGGCGTT CAGTTAACCG GCGATCGCCA TAATCCCCTC
AGTCTGATTG CGAGTTGGCA ACGATAA
 
Protein sequence
MTAQQLWQRY LDWLYYDPSL EFYLDISRMG FDDAFVTSMQ PKFQHAFAAM AELEAGAIAN 
PDEQRMVGHY WLRDPELAPT PELQTQIRDT LAAIQDFALK VHSGVLRPPT GSRFTDILSI
GIGGSALGPQ FVSEALRPQA ALLQIHFFDN TDPAGFDRVL ADLGDRLAST LVIVISKSGG
TPETRNGMLE VQSAFAQRGI AFAPQAVAVT GVGSHLDHVA ITERWLARFP MEDWVGGRTS
ELSAVGLLSA ALLGIDITAM LAGARQMDAL TRHSDLRQNP AALLALSWYW AGNGQGKKDM
VILPYKDSLL LFSRYLQQLI MESLGKERDL LGKVVHQGIA VYGNKGSTDQ HAYVQQLREG
IPNFFATFIE VLEDRQGPSP VVEPGITSGD YLSGLLQGTR AALYENGRES ITITVPRVDA
QQVGALIALY ERAVGLYASL VGINAYHQPG VEAGKKAAAG VLEIQRQIVE LLQQGQPLSI
AAIADDLGQS EQIETIYKIL RHLEANQRGV QLTGDRHNPL SLIASWQR