Gene Synpcc7942_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2025 
Symbol 
ID3774212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2093363 
End bp2094448 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content58% 
IMG OID637800470 
Productglycosyltransferase 
Protein accessionYP_401042 
Protein GI81300834 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.872693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.897375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTG CGATCGTTCA CTATTGGCTG GTGCAAATGC GGGGCGGCGA ACGGGTCTTG 
GAAGCACTCT GCGATCTCTT TCCCGAAGCT GACCTGTTCA CCCATGTCTG CGATCGCGAT
CGTCTCAGCC CGACGCTGCA ACGTCACCGC ATCCAAACCA GCTTCATTCA ACGCTTACCA
GCGGCGCAAC GGCGCTATCC CACCTACCTG CCGCTGATGC CCTTTGCTCT CGAGCAATTT
GACTTGCGGG GCTATGACCT GGTGATCAGT AGTGAGTCTG GCCCTGCCAA AGGCGTGATC
ACGGATCCGA ACAGTCTCCA TATTTGCTAT TGCCACAGCC CGATGCGCTA CCTCTGGGAC
TTAGCGCCCA GCTATCGTCG CCAAGCAGGT TGGTTCAAGC GCCGGGCCAT GGATCTGCTG
TTGCCGCCGC TGCGGGTTTG GGATCAGGCT ACAGCCCAGC GCGTCGATCA TTTTTTGGCT
AATTCTCGCT TTGTTGCTCA GCGGATTCGC AAGTATTACC GCCGTGAGGC GACTGTCTTG
CATCCGCCCG TCCATGCCGA TCGCTTTGCG ATCGCCGACC GTGAGCCAGA GGACTTTTAC
CTCTACGTCG GCCAGCTCGT GCCTTACAAG CGAGCTGATT TAGCGGTCGC AGCCTGTTCC
GCCTTTGGGA AGCGACTCAT TGTGATTGGA GATGGGGAAG AGCGATCGCG ACTGGAAAAA
CTGGCAGGAC CCACCGTGCA GTTTCTCGGT CGTCAGTCCG ATGCTGCGAT CGCCAGCTAC
TACCAGCGAT GCCGCGCCTT GCTGTTCCCT GGGGTTGAAG ACTTCGGTAT CGTGCCCCTC
GAAGCAATGG CCAGCGGTCG TCCAGTGATT GCCTACGGCG ATGGTGGAGC GCTAGAAACC
GTGAAAGCCG GTGAGACGGG CCTCTTCTTT CAGTCCGCTA CCGTTGAAGC GCTCACGAAC
GCGATCACCC AGTTTGAAGT GCAACAGGGA CAGTTTGATC CAGTGGCCAT TCGAGAACAT
GCCATGGGCT TTGATTGCGA TACCTTCAAA ACGAACTTCC AGCGCTTCCT CACGTCGGTG
CTCTAG
 
Protein sequence
MRVAIVHYWL VQMRGGERVL EALCDLFPEA DLFTHVCDRD RLSPTLQRHR IQTSFIQRLP 
AAQRRYPTYL PLMPFALEQF DLRGYDLVIS SESGPAKGVI TDPNSLHICY CHSPMRYLWD
LAPSYRRQAG WFKRRAMDLL LPPLRVWDQA TAQRVDHFLA NSRFVAQRIR KYYRREATVL
HPPVHADRFA IADREPEDFY LYVGQLVPYK RADLAVAACS AFGKRLIVIG DGEERSRLEK
LAGPTVQFLG RQSDAAIASY YQRCRALLFP GVEDFGIVPL EAMASGRPVI AYGDGGALET
VKAGETGLFF QSATVEALTN AITQFEVQQG QFDPVAIREH AMGFDCDTFK TNFQRFLTSV
L