Gene Synpcc7942_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2023 
Symbol 
ID3774210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2091760 
End bp2092221 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content55% 
IMG OID637800468 
Producthypothetical protein 
Protein accessionYP_401040 
Protein GI81300832 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.425613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCATC CGCTTATTCC TGCCATTTTG GATCTGGCAC GTCCCATTGC CGACGACCTC 
GACTTAGAGG TTGTCCAAGC GGTCTTTCAC ACCAACCAAA GCCCCCCTAT CCTCCGCCTC
GATATTCGGA GCCGTGTCGG GGATACCGGT CTTGAAGATT GTGAGCGAAT GAGCCGGAGT
TTCGAACTAG CACTTGATGA GGCCAACATC ATTCCTGATG CCTACGTGCT GGAAATTTCT
AGCCCTGGCC TCTCCGACAC CCTTGAAAGC GATCGCGACT TTCTCTCCTT CAAAGGCTTT
CCTGTCCAGG TGACCAGTCG CTCTCCCAAC GACGACACTG TCGAGCAGCA AGGCACGCTC
CTCGGTCGAG ATGCAGATTC TGTCTATCTC AATAAACGGG GACGGACCGT CCGGATTGCC
CGCAGTCAGG TGCTGGAAGT CAAGCTGATT GAACAGCTTT AG
 
Protein sequence
MAHPLIPAIL DLARPIADDL DLEVVQAVFH TNQSPPILRL DIRSRVGDTG LEDCERMSRS 
FELALDEANI IPDAYVLEIS SPGLSDTLES DRDFLSFKGF PVQVTSRSPN DDTVEQQGTL
LGRDADSVYL NKRGRTVRIA RSQVLEVKLI EQL