Gene Synpcc7942_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2016 
Symbol 
ID3774203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2084803 
End bp2084922 
Gene Length120 bp 
Protein Length39 aa 
Translation table11 
GC content53% 
IMG OID637800461 
Productphotosystem II PsbX protein 
Protein accessionYP_401033 
Protein GI81300825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.304725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGA CGTTGTCTGC TTTCATCTGG AGCCTTGTTC TGGGAGGTGT CATTGTGGTG 
ATTCCTCTGA CGGTTGCGCT CATCTTCATC AGCCAAACGG ATAAAGTCCG TCGCAGCTAG
 
Protein sequence
MTPTLSAFIW SLVLGGVIVV IPLTVALIFI SQTDKVRRS