Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_2012 |
Symbol | |
ID | 3774199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 2081506 |
End bp | 2082729 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637800457 |
Product | stage II sporulation protein D-like |
Protein accession | YP_401029 |
Protein GI | 81300821 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2385] Sporulation protein and related proteins |
TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.703242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATGG CAACCCTCCG GTCGGCGTTG TTCGCCAGCC TTGCAGCGAT CGCTGTTCTT CCGACTTTCA GTCCGCCAGC CAGCGCTCAA GCGGCTCCCA CCATCCGCGT GGGTATTGCG ATCGCCCGCC CCCAGATTCG GGTTGGCAGC TCGACTCCCG CGATCATCCG CAATGAGCAA GGCCAGCAGA TTGGGCAACT TCCCACTCAG CAAGGTAGCT ACGCCCAGCC CTCCGCCAAT GGACAGGTGC AGCTCGGTTC ATTCCGGGCT CGGCAAATTT GGCTAGAACC GACGAATGAC GGTCTCGTTT GGATTGGCGA TCGCTGGTAT CGAGGGCGCC TGCAACTGAT TCTGGATCAA GGGGCAGTCA CGGCCATCAA TCATGTCGGG CTGGAGTCCT ATCTTTACAG CGTTGTCGGC AGCGAGGTCT ATGCCAGTTG GCCAACAGAG GCTCTGAAAG CCCAAGCTGT GGCCGCTCGC TCTTTTGTGC TCTACCGTCG CGATCGCAAC CGCGATCCTC GCTTTGATGT TGGCAATTCC ACGACTTGGC AGGTCTACAA AGGGATCGCC AGTGAAGCCC CAACCACGAT CGCAGCGGTC AATGCCACAG CCGGCCAAGT CCTGACCTAC AACAACCGTG TCATTGAAGC CGTCTTCCAC GCCTCCAGTG GCGGACATAC TGAAAACGTC GAAGATGTCT GGAGCAAGCC CCTGCCCTAC CTACGAGGGG TCCAAGACTA CGACCAAAAC GCACCAGTCT TTAACTGGAG TCAAAGTTTT TCGGTGCAAG AGCTCTCAGC CAAGCTAACC GGCGTCGGCC GGATTCTCCA GATTGAGCCC CTCCAAACAA CGCCCTTCGG CCGCATTCGA GATTTGCGCA TCACGGGCGA TCGCGGCAGC CGGGTGGTTA AAGGAGATGA AGTACGTCGT GCCTTAAATC TCCGCAGCAG TCTATTCACC GTCAGCAGTG AAGCCAGCAG CAATTGGTTC GACTTCCTCC GACCCAATCC AGCCCCCCAA CCCCCCAGCC AGTTCACGAT TATTGGCCGC GGCTATGGCC ATGGTTTGGG TCTCAGCCAG TGGGGGGCCT ATGGCCTCGC CAGCCAAGGC GTAGACTACC GCCGCATTCT TTCGCATTTC TACCAGAACA CCAATCTCAG TCCCCTAGGT GGGGTGATCG CCCAGAACTC AAGCGGCGGC GACCTCATCA GTGCTCAAGA CTAG
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Protein sequence | MPMATLRSAL FASLAAIAVL PTFSPPASAQ AAPTIRVGIA IARPQIRVGS STPAIIRNEQ GQQIGQLPTQ QGSYAQPSAN GQVQLGSFRA RQIWLEPTND GLVWIGDRWY RGRLQLILDQ GAVTAINHVG LESYLYSVVG SEVYASWPTE ALKAQAVAAR SFVLYRRDRN RDPRFDVGNS TTWQVYKGIA SEAPTTIAAV NATAGQVLTY NNRVIEAVFH ASSGGHTENV EDVWSKPLPY LRGVQDYDQN APVFNWSQSF SVQELSAKLT GVGRILQIEP LQTTPFGRIR DLRITGDRGS RVVKGDEVRR ALNLRSSLFT VSSEASSNWF DFLRPNPAPQ PPSQFTIIGR GYGHGLGLSQ WGAYGLASQG VDYRRILSHF YQNTNLSPLG GVIAQNSSGG DLISAQD
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