| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2011 |
|---|
| Symbol | |
|---|
| ID | 3774198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2080210 |
|---|
| End bp | 2081391 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637800456 |
|---|
| Product | ribonuclease Z |
|---|
| Protein accession | YP_401028 |
|---|
| Protein GI | 81300820 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | [TIGR02651] ribonuclease Z |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGGTCA CTTTTCTTGG TACGAGTTCC GGCGTACCCA CGCGATCGCG CAATGTCTCG
GCCGTTGCAC TGCGCTTGCC CCAGCGTGCC GAGGTCTGGC TGTTTGACTG TGGCGAGGGC
ACACAGCATC AATTTCTGCG GAGTGAACTG CGGATCAGTC AGCTACGGCG CATCTTCGTC
ACCCACATGC ACGGCGATCA TGTCTTCGGT TTGATGGGGT TGTTGGCCAG TGTGGGTTTG
GCGGGAAATC CAGAGCGCAT CGACCTCTAT GGTCCCAAGC CCCTGCGTGA TTATTTGCAG
GCCTGCGCCC AGCATTCGCG CACCCATATC AACTATCCGT TGCAGATTGC GACGGTGCAG
CCGGGAGTGA TCTACGAAGA TGCAGAGATC GTTGTCAGTT GTGCGCCCTT GCATCACCGT
GTGCCGGCCT TTGGCTACCG CATTCAAGAG CGCGATCGCC CCGGTCGGTT TGATGTTGAG
AAAGCACGAT CGCTGGGCAT TCCGCCAGGG CCAATTTACA AGCAACTGAA GGATGGCGAG
ACGGTCACTC TAGAAGATGG TCGCCAGATT GACGGTCGGC AGCTCTGCGG CCCAACAGAG
CGCGGCCGTA GCATGGTCTA TTGCACCGAC ACGATTTTCT GTGAGTCAGC GATCGCACTG
GCTCAGGATG CCGATGTCCT GATTCACGAG TCGACCTTTT CCGATCGCGA TCGCGAGATG
GCTGAGCAGC GCTTGCATGC GACGGCGACA ATGGCAGCAG AGGTCGCCAA ACAAGCGGGT
GTCCGGCAGT TGATCCTCAC CCACTTCAGC CCGCGTTATG CCCCAGGCAA TGAGCAGACC
CTCGATGATT TGCTCGCGGA AGCCCAGGCC ATTTTCCCGC AGACGATGCT GGCCAAGGAT
TTCCTCAGCT ACGATGTGCC CCGCCGTCTA GCTGCAGATG CAGATGAGCC GACGGAAGTT
CCAGCCGTCG CTAAAAGCCC GAGTCAGCCA GAGCCCAGCG CGATCGTTCC TGACTCGCGG
CGGAAGCCTC AAATTACCAA GGAAGTGTTG GTGGCTCGCT TCAGTGGAGA AGGAGAACCA
GCCCATCGTG CCGCCTATCG CTACCTGCGG GAAACCTGCG GTGTGACCCC TAAAGGGCGG
AGCTGGGAGG CTGTGCTGGC AGCCTTCAAC AGCTTGGATT AG
|
|---|
| Protein sequence | MQVTFLGTSS GVPTRSRNVS AVALRLPQRA EVWLFDCGEG TQHQFLRSEL RISQLRRIFV
THMHGDHVFG LMGLLASVGL AGNPERIDLY GPKPLRDYLQ ACAQHSRTHI NYPLQIATVQ
PGVIYEDAEI VVSCAPLHHR VPAFGYRIQE RDRPGRFDVE KARSLGIPPG PIYKQLKDGE
TVTLEDGRQI DGRQLCGPTE RGRSMVYCTD TIFCESAIAL AQDADVLIHE STFSDRDREM
AEQRLHATAT MAAEVAKQAG VRQLILTHFS PRYAPGNEQT LDDLLAEAQA IFPQTMLAKD
FLSYDVPRRL AADADEPTEV PAVAKSPSQP EPSAIVPDSR RKPQITKEVL VARFSGEGEP
AHRAAYRYLR ETCGVTPKGR SWEAVLAAFN SLD
|
|---|
| |