Gene Synpcc7942_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2006 
Symbol 
ID3774193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2074598 
End bp2075284 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content59% 
IMG OID637800451 
Producthypothetical protein 
Protein accessionYP_401023 
Protein GI81300815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAAG CCCAATCACT CGATGTCTTG AACTTGCTAG AGCAGCTCGA AGAGTCTGTG 
CTCGACGGGA CTCGCGTGCC GCTTTCGGGG CGCATTCTGG TTCGAGAAAA CGACCTGCTC
GACCTGTTAG ATGACGTGCG TGCCGGGTTG CCCGCTGCGA TTCAACAAGC TCAGCAAATC
CTCGAGCGCC AAGCCCAAAT TTTGGCTGAC GCCCAACAGC AAGCACAGGC GATCGTGGCG
CAGGCGCAGC AAGAACGGGC CCTGCTGATT GACCAAAACA GTATTCGGCT TCAAGCTGAG
CGCGATGCGC AGCAGCTCCG CCAAACCCTT CAACAGGAAT GTGATGCCCT TCGGCAACAG
GCGATCGCGG AAGCAACACA AGTGCGGGGC GAGGCCCAAC AGTTCCAGCT CCAAGTCCGC
CAGGAAACCG ACAGTCTTCG CCAGCAGACC CAAGCCGAAA TCGAGCAGCT GCGCAGCCAA
ACTCAACAGC AGCTATCTGA GCAGCGCCAA AGGATTTTGG TCGAATGTGA GGAGTTGCGG
CGGGGTGCTG ACAGCTATGC TGACCAAGTT CTGCGGGACA TGGAGCAGCG ATTGACCCAG
ATGATGCAGA TCATCCGCAA TGGTCGTCAG GCCCTGAACT TGAGCGAAAA TACGCCGCCC
CCTGCTCCCC GTCGGCGATC GCGCTAA
 
Protein sequence
MTQAQSLDVL NLLEQLEESV LDGTRVPLSG RILVRENDLL DLLDDVRAGL PAAIQQAQQI 
LERQAQILAD AQQQAQAIVA QAQQERALLI DQNSIRLQAE RDAQQLRQTL QQECDALRQQ
AIAEATQVRG EAQQFQLQVR QETDSLRQQT QAEIEQLRSQ TQQQLSEQRQ RILVECEELR
RGADSYADQV LRDMEQRLTQ MMQIIRNGRQ ALNLSENTPP PAPRRRSR