Gene Synpcc7942_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2005 
Symbol 
ID3774192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2073628 
End bp2074449 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID637800450 
Producthypothetical protein 
Protein accessionYP_401022 
Protein GI81300814 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC CTGTTACGCC CGAACAAATT GAGCTACTCG TTGCAGGGTA CGTCCTTGGG 
GATCTGAGCC CAGAGGAAGC CGACGAGTTG GAGCAACTCC TGCAGGACGA TCCAGACCTG
TGGGTTGCGG TCAGCGAGGC TCAAATAGCC CTCGAGCAAA GCTTTGGCAT CGAGGAACAA
GCGCCGCCGA CCTATCTCAA GCAATCCATT CTGAGTGCCG CCGAAGTCCT GCAACAGGCA
GCAGTAGCCA GCGATCGCAC TCCCGAGTCT GGACCTGCCG TTCTTCCATC AATTCCTGCG
AGTCCAGCCC CCAGCAATGT CATTCCTCTG AGTCGTTGGC GACGGGGACT CGGCGCTGCG
GCGGCTGTCG TCATTGCCGG CTTAGGCATC AGCAACATCA TTCTCTGGCA GTCCCTACAA
TCCCTCCAGG TCAGCCGCCG GACAACCGAT CAAAATCCAC TGGTGTTCAC CCTCGAGCGC
ACACCCCTCG CGCCCAGCCC AGATGCATCT GTGCAGGTGG TTGTCGATCC CAAGGATTTG
GAAGCGACCC TCGACATCAA AAACTTGCCG CCCTTAGCGG ACGGCGAAGT CTACGTGCTC
TGGACGGTGG TGAAACCCAA TGCCCCAGTC ACGACTGATG ACAAAGATGC GATCCTGACC
CAAGTGTTCC GCGTCGATGC TCAAGGTCAA TTCAGCCAGC GCATTGCAGT ACCGCCCGTT
TTTCGCGATC GCGGTTTAGT CCAAGCTGTC GCCGTCACGA TTGAGAACGC AAAGGCCCCT
CAAAAGCACC TTGCCAAACC GATTTTGATT CAGCGGATTT AA
 
Protein sequence
MTAPVTPEQI ELLVAGYVLG DLSPEEADEL EQLLQDDPDL WVAVSEAQIA LEQSFGIEEQ 
APPTYLKQSI LSAAEVLQQA AVASDRTPES GPAVLPSIPA SPAPSNVIPL SRWRRGLGAA
AAVVIAGLGI SNIILWQSLQ SLQVSRRTTD QNPLVFTLER TPLAPSPDAS VQVVVDPKDL
EATLDIKNLP PLADGEVYVL WTVVKPNAPV TTDDKDAILT QVFRVDAQGQ FSQRIAVPPV
FRDRGLVQAV AVTIENAKAP QKHLAKPILI QRI