Gene Synpcc7942_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_2003 
Symbol 
ID3774190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2072093 
End bp2072806 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID637800448 
Producthypothetical protein 
Protein accessionYP_401020 
Protein GI81300812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC TTAGAGCACT CAACCCCACG AGCCCTATCC ATTCAGGTTT TTTCCCAATG 
CTGATCCCTA GACTCCGCCT ACGGTCGATC GCGATCGCGC TAGGCACCTG TCTCTTGCTC
ACTGGTCTGC ACACGACGTT CCCAAGGCCC GTGCGGGCAA CAGTCTCCCA GCCAACGCCC
TTGATGGAGA CTGCGCAATC GCAATCCTTG AGCCGACCAA CCTTGCTCGC AGACTTACAG
GCTACCCTCA GCCAAGCAGA ATCCAGCCCG CTTGCCCAAG CCAATGCTGG CGAGATGCGC
CAAACCTACA TTGCCATCCT GACGCCGCGC GAAGTTGTCC CCACAGCACC TGAAACACCA
GCTAGAGCCG TGGTGGGTGC CGTATTAGTC GGCGATCGCT TGGTGATCCG CGCTAACTTC
CGCGATCTTT CCAGTGCCTT TCGCGACTAT GCGAAGGATC CCGTCAGCCC GCCCAACCCC
AACATCACCT CGGGCTTCCA CCTGCATCGG GGCAATGCCA ATCAAAATGG CCCCTTTCAG
TACGCTTTGG TCGTCACCCT AGACCCTTCA GGAACCAGCG GTTCCGCAGC GGGGGAACTG
ACGTTGTCGC CGGAACAGAA GCAAGCACTG GCAGATGGCC TGATCTACTT CGACATTCAC
ACCACTCGCA ACCGCGGCGG CGAACTGCGG GGCGTGTTGA TGCCCAGCTC GTAG
 
Protein sequence
MSLLRALNPT SPIHSGFFPM LIPRLRLRSI AIALGTCLLL TGLHTTFPRP VRATVSQPTP 
LMETAQSQSL SRPTLLADLQ ATLSQAESSP LAQANAGEMR QTYIAILTPR EVVPTAPETP
ARAVVGAVLV GDRLVIRANF RDLSSAFRDY AKDPVSPPNP NITSGFHLHR GNANQNGPFQ
YALVVTLDPS GTSGSAAGEL TLSPEQKQAL ADGLIYFDIH TTRNRGGELR GVLMPSS