| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2000 |
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| Symbol | |
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| ID | 3774187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 2067958 |
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| End bp | 2070180 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637800445 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_401017 |
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| Protein GI | 81300809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein)
[COG1716] FOG: FHA domain |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC GCCCGCAGCC GGCACCCACC GTCCTGAAAC GCCTGACCCA ATTGGCAACG
CAGGTTCAGC GACGGGCCAA GTTTGATAAT CTCAACCTGC GTGACTCTGA CTCAGTTCCC
CAATTGACGG TCTGTCAGGG AGACCGCCGG CAGTCTTATC CGCTGCTTGG GGACTATTAC
CGCCTGGGCC GAGGCCGTGA CTGTGACATC CCGATTGATA GCCCGATCGT CAGCAAGCTT
CACCTCAGCC TCGGTCGCTC GGGCAAAGAG CGCGGTGACT TTGTCCTGCA AGACGAAAAC
TCGACCAACG GCGTCTTTTG GCGGGGCCGC CGTGTCGATC GCTTGGAATT ACAGCATGGC
GATCGCATCT ACCTGGGGCC ACCAGAGCTG ACCGATCGCG TTGAGCTGCT CTATGAAAAC
GCTCCTCCTC TCTGGCAGGA CTGGCTGAAA CGAGGGGTGA CTATCACTAC AGCTGTGGTC
GGAGCGATCG CGATCGGCAT TACCCTCGAG GCCAGCCGAG TCTCCGTGCG ATCGCTGGGG
ACGGTGCAAG GACCGATCGC TGCCTATGCC GCTGATGGCG AGCCCCTACA AACTCTGCGC
AGTAGTAGCC ACGTCGAATT ACCGGCCCTC TCAGATTTTT CGCCCGTTCT CCCCAAAGCC
CTGCTTGCCT CCGAAGACAG TCGCTTCTAC TGGCATCTGG GTATCGATCC CTACGGCACG
GCGCGTGCGA TTCTGACTAA CTTCCGCAGT GGCGAAGTTC GCGAAGGCGC CAGCACCCTC
ACCCAGCAGA TTGCTCGCAG CCTATTTAGC GACTACGTCG GGCGTGAGGA CTCGATTGGT
CGCAAAGTCC GCGAAGCGAT CCTGGCGCTG AAGCTGGAGT TTTTCTACAG CAAGGATGAG
CTGCTGCGCA CCTACCTCAA CCGGGTTTAC CTTGGGGTCG GCTATGGCTT TGAAGACGCT
GCCCAGATTT ACTTTGGCAA GTCTGCCCGT GATCTCTCGA CCTCCGAAGC GGCGCTGTTG
GTGGGACTCT TGCCCTCCCC CAATGGATTT AGCCCCTGCA CCAACCTCGC TGCTGCCCAG
CGCCAAAAAA ATGGTGTGAT TGAACGGATG CAGTCCCTCG GTTTGATCAG CGAAGAGGAG
GCCCGCACGG CGCGGCGATC GCCGGTGACA ATTAAGCCGG AGGCTTGCCA AACCAGCAGC
CGAGTCACCG CCCCCTATTA CTACGGCGCC GTGGTTGAGG AACTGGCTCA ATTAGTGGGT
GACACAGTCG TTGAAGAAGG CAACTTTGCC GTTGAGACCA GCCTCAATCC TGCGATGCAA
ACTGCGGCTG AACAATCTCT GCAGTCGCTC TTGGCACAAA CAGCCGGTGT CAAACAAGGG
GCGATCGTCA CGATTGACAG TCGTAATGGC GAAATCCGAG CCCTCGTCGG TGGGGTCGAT
TACCAAGCGA GTCAGTTCGA TCGCGCCACC CAGGCCTATC GTCAGCCGGG TTCGACCTTC
AAAGTCTTTG CCTATGCAGC AGCCCTAGAA CAAGGCATTT CGGCCGGACG ACCCTACGAT
TGCTCGCCTC TTGTCTGGCA AGGTCAGCAA TTTCGGGGCT GTGAACGCAG CAGTGGCAGC
ATTGACCTCG CCCGCGCCTT GGCTCAATCC GAAAATGCGG TGGCTCTGCG CGTCGCCCGC
GAGGTGGGGC TGGATGCCGT TGTGCAGATG GCCCGCAAGT TTGGCATTAA AGCGGATCTA
CAACCCGTCC CCGGCCTGGT ATTGGGGCAA AGTGAGGTGA CATTGCTGGA AATGACCAGC
GCCTTTGCTG CGATCGCCAA CGAAGGGCGT TGGAACCCGC CCCATGCCAT CCGCCGCATC
TACGACAGCA GCCGTTGCAC CACTGCGGAG CAACGTCGGA GTTGCACCCT TACCTTTGAT
GTCCAGCAGC AACCCCGCCG CGATCGCGTT GTGATTTCAG CCGCGACGGC TGCGACCCTA
ACGGCCATGC TGCAACAGGC GGTGAGTAGT GGGACTGGCG GAGCCGCTGC GATCGGCTAT
GGAGCAGCGG GCAAAACTGG TACGACGAAT GATGGCGTTG ATCTTTGGTT TGTGGGCTTT
GTGCCCTCTC GCCACCTGGT CACTGGCGTT TGGCTCGGCA ACGACGACAA CCAGCCGACC
GGTAACAGTA GCAGCTTGGC AGCCCAGCTT TGGGGCGACT ACATGGCCCG AATACTGCGC
TGA
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| Protein sequence | MSDRPQPAPT VLKRLTQLAT QVQRRAKFDN LNLRDSDSVP QLTVCQGDRR QSYPLLGDYY
RLGRGRDCDI PIDSPIVSKL HLSLGRSGKE RGDFVLQDEN STNGVFWRGR RVDRLELQHG
DRIYLGPPEL TDRVELLYEN APPLWQDWLK RGVTITTAVV GAIAIGITLE ASRVSVRSLG
TVQGPIAAYA ADGEPLQTLR SSSHVELPAL SDFSPVLPKA LLASEDSRFY WHLGIDPYGT
ARAILTNFRS GEVREGASTL TQQIARSLFS DYVGREDSIG RKVREAILAL KLEFFYSKDE
LLRTYLNRVY LGVGYGFEDA AQIYFGKSAR DLSTSEAALL VGLLPSPNGF SPCTNLAAAQ
RQKNGVIERM QSLGLISEEE ARTARRSPVT IKPEACQTSS RVTAPYYYGA VVEELAQLVG
DTVVEEGNFA VETSLNPAMQ TAAEQSLQSL LAQTAGVKQG AIVTIDSRNG EIRALVGGVD
YQASQFDRAT QAYRQPGSTF KVFAYAAALE QGISAGRPYD CSPLVWQGQQ FRGCERSSGS
IDLARALAQS ENAVALRVAR EVGLDAVVQM ARKFGIKADL QPVPGLVLGQ SEVTLLEMTS
AFAAIANEGR WNPPHAIRRI YDSSRCTTAE QRRSCTLTFD VQQQPRRDRV VISAATAATL
TAMLQQAVSS GTGGAAAIGY GAAGKTGTTN DGVDLWFVGF VPSRHLVTGV WLGNDDNQPT
GNSSSLAAQL WGDYMARILR
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