Gene Synpcc7942_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1985 
Symbol 
ID3774172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2055445 
End bp2056338 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content57% 
IMG OID637800430 
Producthypothetical protein 
Protein accessionYP_401002 
Protein GI81300794 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3001] Fructosamine-3-kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.450532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG CAGAGTCTCT TTGGAGCGCG ATCGCGGCGG TGATTAATAC TCAGCGCGAT 
CGGCCAAGCC TAATTCAGCA GGCCCAACCC GTGGGTGGTG GCTGCATCAA CCGCAGCTAT
CGCCTGGTGC TGGAAGATGG GCAAGCTTGG TTTGTCAAAC TCAATCAACG CGACTCTTTA
GCGGCTTTTG CGGCGGAAGC AGAAGCCCTG ACCGCGATCG CAGCCAGTCA AACAATCCGA
GTGCCTCAGC CAATTGCTTG GGGAGAGACC AATCGCAGTG CCTACCTAGT GTTGGAATGG
CTAGAGCTTG ATCGCGGCCC CACAGATTGG CGACAGATGG GGGCCCAATT GGCGCAGTTG
CATCGTCAGA CTCGCTCACC TCAGGGTTTT GGCTGGCATC GCGACAATGT GATTGGCCAA
ACCCCACAAA TCAACCCGTG GCAATGGGAT TGGGGAGCAT TCTGGCAAGT CCAGCGTATT
CAGTTTCAAC TGGATCTGGC TGCCCGTAAC GGCTACCGCT GGCCCCATGC CCAAGCACTG
TGCGATCGCA TTCCCGATCT TCTGGCCGAT CATCAACCCA AGCCTGCATT GGTGCATGGC
GATCTTTGGT CGGGAAATGC CAGCTTCCTG GCAGACGGCA CGCCAGTCAT CTTTGATCCG
GCGACCTACT ACGGCGATCG CGAAGTCGAT CTAGCGATGA CCGAACTATT TGGGGGTTTC
CCTCCAGCTT TTTACGAAGG CTACCGCCAG GTTTGGCCGC TGGATCCGGG CTATCGCAGC
CGCCGCGATC TCTACAACCT CTATCACGTT CTCAATCACG TCAACTTGTT TGGCGGGGGC
TATGTCCACC AGGCTCAACG ACTGATCGAT CGCCTTCTGG CAACGAACCG TTGA
 
Protein sequence
MAEAESLWSA IAAVINTQRD RPSLIQQAQP VGGGCINRSY RLVLEDGQAW FVKLNQRDSL 
AAFAAEAEAL TAIAASQTIR VPQPIAWGET NRSAYLVLEW LELDRGPTDW RQMGAQLAQL
HRQTRSPQGF GWHRDNVIGQ TPQINPWQWD WGAFWQVQRI QFQLDLAARN GYRWPHAQAL
CDRIPDLLAD HQPKPALVHG DLWSGNASFL ADGTPVIFDP ATYYGDREVD LAMTELFGGF
PPAFYEGYRQ VWPLDPGYRS RRDLYNLYHV LNHVNLFGGG YVHQAQRLID RLLATNR