| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1984 |
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| Symbol | |
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| ID | 3774171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2054486 |
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| End bp | 2055412 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637800429 |
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| Product | phytoene synthase |
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| Protein accession | YP_401001 |
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| Protein GI | 81300793 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.735846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.234628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAGA TGATACCGGC ACGGCCTTCA CGGGCGCTCG CCTCTCTGTC GGAGGCCTAC
GAGGAGTGCC GACAAATTAC CGCTCGCTAC GCTAAGACCT TTTACCTCGG GACGCTTTTG
ATGCCCGAGG CCAAGCGTCA GGCCATCTGG GCCATCTACG TCTGGTGTCG TCGTACCGAT
GAACTAGTCG ATGGCCCTCA AGCAGCGCAG ACTAACTTCG CGACCCTGGA TGCTTGGGAG
CGGCGGTTGG AACGACTGTT TGCTGGGGAA CCCGAAGACG ACTGCGATGT TGCCTTGGTG
GATACCTTGG CTCGCTATCC TCTCGATATC CAGCCCTTCC GCGACATGAT CGAAGGGCAG
CGGATGGATC TGCTGCAAAA CCGCTATTCC ACTTTTGAGG ATCTCTACAC CTACTGCTAC
CGTGTCGCCG GTACTGTGGG ACTGATGTCA CAGCCGGTGA TGGGCATTGA ATCGACCAAT
AGTCGTGCCC CTTGGGATCC GACAACTCCG CCCGACCCAA CGCAAGAAGC GCTAGCACTT
GGCATTGCCA ACCAGCTCAC CAATATTCTG CGCGATGTCG GTGAAGATGC CCGTCGAGGC
CGCATCTATC TCCCCCAAGA GGAGCTAGCG CAGTTCAACT ACAGCGAACA AGACTTGTTC
AATGGCGTGA TTGACGATCG CTGGCGGGCC TTTATGCAGT TCCAGCTTGA TCGCGCTCGT
GATTACTTTG AGCAAGCCGA GCGTGGCATT CGTCAACTCA GCCATGATGC TCGCTGGCCA
GTCTGGGCCT CCCTGATGCT CTATCGCGAA ATTCTCGATG TGATTGAGCA GAATAACTAC
GACGTCTTCC GAAAGCGGGC CTACGTACCG ACTTGGCGGA AACTCTGTAG TCTGCCGGTG
GCAATGCTAC GAGCTACGGT TCTTTAG
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| Protein sequence | MLQMIPARPS RALASLSEAY EECRQITARY AKTFYLGTLL MPEAKRQAIW AIYVWCRRTD
ELVDGPQAAQ TNFATLDAWE RRLERLFAGE PEDDCDVALV DTLARYPLDI QPFRDMIEGQ
RMDLLQNRYS TFEDLYTYCY RVAGTVGLMS QPVMGIESTN SRAPWDPTTP PDPTQEALAL
GIANQLTNIL RDVGEDARRG RIYLPQEELA QFNYSEQDLF NGVIDDRWRA FMQFQLDRAR
DYFEQAERGI RQLSHDARWP VWASLMLYRE ILDVIEQNNY DVFRKRAYVP TWRKLCSLPV
AMLRATVL
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