| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1983 |
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| Symbol | |
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| ID | 3774170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 2052981 |
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| End bp | 2054405 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637800428 |
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| Product | zeta-carotene desaturase / three-step phytoene desaturase |
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| Protein accession | YP_401000 |
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| Protein GI | 81300792 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02731] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.490957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.280593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTAG CGATCGCCGG TGCCGGACTT GCCGGACTCT CCTGTGCCAA GTACTTGGCC
GATGCCGGTC ATACGCCCAT CGTCTATGAA CGTCGGGACG TCCTTGGCGG CAAGGTTGCC
GCTTGGAAAG ATGAAGACGG CGACTGGTAC GAAACTGGCC TACATATCTT TTTTGGGGCT
TACCCCAACA TGTTGCAGCT CTTTAAGGAG CTGAACATTG AAGATCGCCT GCAGTGGAAG
TCCCACTCGA TGATCTTCAA CCAACCCACA AAGCCGGGCA CCTATTCGCG CTTCGACTTC
CCAGACATTC CAGCGCCAAT CAACGGTGTT GCAGCAATCC TCAGCAACAA CGACATGTTG
ACCTGGGAAG AAAAAATCAA GTTTGGCTTG GGCTTGTTGC CAGCGATGAT TCGCGGCCAG
TCCTACGTCG AAGAGATGGA TCAATACTCA TGGACGGAGT GGCTGCGCAA ACAAAATATT
CCAGAGCGGG TCAACGATGA AGTCTTCATC GCCATGGCTA AAGCGCTCAA CTTTATTGAC
CCGGACGAAA TTTCCGCCAC GGTCGTCCTA ACGGCACTCA ACCGCTTCTT GCAAGAGAAG
AAAGGTTCAA TGATGGCCTT TTTGGATGGT GCGCCGCCCG AGCGTCTTTG CCAGCCGATC
GTCGAACATG TCCAAGCTCG CGGTGGTGAT GTGCTGCTGA ATGCGCCTCT GAAAGAGTTC
GTGCTCAATG ACGACAGTAG CGTCCAAGCT TTTCGGATTG CTGGCATCAA AGGTCAAGAA
GAACAACTCA TTGAGGCAGA TGCCTACGTT TCGGCACTGC CGGTTGATCC GCTCAAGCTA
CTGTTGCCGG ATGCATGGAA AGCCATGCCC TACTTCCAGC AACTCGATGG TCTGCAGGGC
GTGCCGGTCA TCAACATTCA CCTCTGGTTC GATCGCAAGC TGACCGATAT CGATCACCTG
CTGTTCTCGC GATCGCCCCT GCTCAGTGTC TATGCCGACA TGAGTAACAC CTGTCGCGAG
TACGAAGATC CCGATCGCTC AATGCTAGAG CTGGTCTTCG CCCCCGCCAA AGACTGGATT
GGCCGCTCCG ACGAAGACAT CTTGGCTGCC ACCATGGCCG AGATTGAAAA GCTATTCCCA
CAGCATTTCA GCGGTGAGAA TCCGGCACGT CTGCGCAAAT ACAAAATTGT CAAAACGCCC
CTGTCGGTCT ACAAAGCCAC GCCGGGCCGT CAACAATATC GCCCCGATCA AGCTAGCCCG
ATCGCTAATT TCTTCCTGAC CGGCGACTAC ACCATGCAGC GCTACCTCGC CAGTATGGAA
GGGGCGGTCC TATCTGGTAA GCTGACAGCG CAAGCCATCA TTGCTCGCCA AGATGAGTTG
CAACGTCGCA GCAGCGGACG ACCGCTGGCC GCGAGTCAGG CATAG
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| Protein sequence | MRVAIAGAGL AGLSCAKYLA DAGHTPIVYE RRDVLGGKVA AWKDEDGDWY ETGLHIFFGA
YPNMLQLFKE LNIEDRLQWK SHSMIFNQPT KPGTYSRFDF PDIPAPINGV AAILSNNDML
TWEEKIKFGL GLLPAMIRGQ SYVEEMDQYS WTEWLRKQNI PERVNDEVFI AMAKALNFID
PDEISATVVL TALNRFLQEK KGSMMAFLDG APPERLCQPI VEHVQARGGD VLLNAPLKEF
VLNDDSSVQA FRIAGIKGQE EQLIEADAYV SALPVDPLKL LLPDAWKAMP YFQQLDGLQG
VPVINIHLWF DRKLTDIDHL LFSRSPLLSV YADMSNTCRE YEDPDRSMLE LVFAPAKDWI
GRSDEDILAA TMAEIEKLFP QHFSGENPAR LRKYKIVKTP LSVYKATPGR QQYRPDQASP
IANFFLTGDY TMQRYLASME GAVLSGKLTA QAIIARQDEL QRRSSGRPLA ASQA
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