Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1978 |
Symbol | |
ID | 3774165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 2049645 |
End bp | 2049980 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637800423 |
Product | thioredoxin |
Protein accession | YP_400995 |
Protein GI | 81300787 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.274716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.21653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCAG TCGTCACAGC GCAAACCTTC AGCGCTGAAG TACTCCAAGC AAAAGATCCT GTTCTGGTTT ACTTCTGGGC TGCTTGGTGC GGGCCCTGTC GACTCTTAAC TCCCTGCCTC GAACAATGGC ATCAGACGGC TAGCCAAAAT CTACGGGTGG TCAGCATTAA TGCCGATGAA AATTTCACCT TGGCCAATCG CTATCGACTA GCGACGTTGC CGACCCTGAT CTGGTTTGCA GACGGTCGCA TTCGCGATCG CCTAGAAGGG ATCAGCGATC GCGAAGCCCT GCAGACCTTC CTCAAGCGCT ACCAACCTGT GGCAAATGCC GTCTAA
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Protein sequence | MLPVVTAQTF SAEVLQAKDP VLVYFWAAWC GPCRLLTPCL EQWHQTASQN LRVVSINADE NFTLANRYRL ATLPTLIWFA DGRIRDRLEG ISDREALQTF LKRYQPVANA V
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