Gene Synpcc7942_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1975 
Symbol 
ID3774162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2045410 
End bp2045763 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content54% 
IMG OID637800420 
Producthypothetical protein 
Protein accessionYP_400992 
Protein GI81300784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.698975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAG TTAATTTTGT TGTGATCTTC GTGATCAGTC TCGCTCTTGT GCTCTTTAGC 
CTCGAGAATA CCGAGACTGC CACCATCCAT GTCTTGGGTA GCACGGAACT CACAGCTCCT
CTCGCCGTAG AGCTGATCGT GGCTATGGGG ATTGGCGCGG TCTTTGCCTG GATCTTCAGT
GTTTGGTCGG GGGTTCAAAA ACTGGTGGCC CTGAAAGCAG AGCAAGAGCA GATGGAAGCT
CAGCAGGTGC GGATTCAGGA ATTGGAAGAG GACCTGACCC GCTACAAAAC GGAGCTAGAG
GTGCAGCAAA AGCTGCTGCC TTCTGCGGCG ATCGGAACCT CTGAAGACGC CTAA
 
Protein sequence
MRQVNFVVIF VISLALVLFS LENTETATIH VLGSTELTAP LAVELIVAMG IGAVFAWIFS 
VWSGVQKLVA LKAEQEQMEA QQVRIQELEE DLTRYKTELE VQQKLLPSAA IGTSEDA