Gene Synpcc7942_1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1968 
Symbol 
ID3774155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp2038685 
End bp2040043 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content56% 
IMG OID637800413 
Producthypothetical protein 
Protein accessionYP_400985 
Protein GI81300777 
COG category[C] Energy production and conversion 
COG ID[COG1625] Fe-S oxidoreductase, related to NifB/MoaA family 
TIGRFAM ID[TIGR03279] putative FeS-containing Cyanobacterial-specific oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.161355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTT CGACCCTTCA ACCCGCCCGC ATTAGCCGAG TCTTACCAGA TTCCATTGCG 
GCAGAGATCG GGTTTGAGCC CGGCGACGCA ATTATTTCAA TCAATGGCCA GCAACCCCGC
GATCTGATCG ATTATCAATT CCTCTGCAGT GATGAATTTT TAGAGCTGGA GGTCTTGGAT
GCAGCCGGGC GATCGCACCA AATCGAAATT GAAAAAGACA CCGATGAAGG GCTTGGGCTG
GAATTTGAGA CCGCGCTCTT TGACGGTTTG ATTCAGTGCA ACAACCGCTG CCCCTTTTGC
TTTATCGATC AACAGCCACC GGGCAAACGC GAGAGCCTGT ACTACAAAGA TGATGATTAT
CGCCTCAGTT TTCTCTATGG CTCCTACCTC ACCCTCACCA ACCTCAGCGA AGCGGAATGG
CGACGGATTG CCCAACTGAG GCTCTCGCCC CTCTACGTTT CAGTACATGC CACTGAGCCC
GATCTGCGGC GGCGTCTTCT CAAAAATGAA CGGGCCGGAT TGATTGGAGA ACAACTGCAC
TGGTTTCGCC AGCAGCAGCT GCAAATTCAT GCCCAAGTGG TGGTCTGTCC CGACCTCAAT
GATGGGGCGC AACTACAGCG TACCTTGATG GATTTGGCTG AATTTCATCG CGGGGATCCG
GCAACCGTCG CTTCCGTGGC CGTCGTGCCC GTGGGCCTGA CCCGCTTTCG ACCGACTGAA
GATGAATTGC GTCCTGTCCA GCCTGCTGAT GCGGCTGCCA CGATCGCCCT GGTCGAAGCC
CTGCAAACTC AATTCCAAAC AGAACTGGGC AGTCGTTTTG CCTGGTTAGC CGATGAGTGG
TATCTGATTG CAGGCCAGCC GCTGCCCTCG GCCAGTTGGT ATGAACAATA TCCCCAGCTA
GAAAATGGCG TCGGTTCTAT CCGGGCCTTC ATCAGTGAGT TTGAACGCCA AGCAGCAACG
CTACCCAGCC AGATCGAGCC AGCGCGCCGT CTTACTTGGG TGGTCGGCAA TGTGGTGGAG
CAAGCCTTCC AACCGCTACA GGCCCGCCTC AATGCAGTGC AAGGTCTACA GGTTGATCTG
GTGGGGCTCG CCAGTCGCTA CTGGGGGCAA ACCCTCACGG TCACAGGGCT ACTTACTGGC
CAGGATTTGA TTGAGGCTTT GAGCGATCGC GACTTGGGAG ATGGGCTGTT ATTGCCTTCC
GTGATGTTGC GTCATGGCGA TCGCTGCTTC CTCGACGACT TGACGGTGGC AGAGGTTGAA
AAGGCGCTGC ACACGCCGAT CTTTGTTGCT GAAGGAATTA CGGGTCTGTT GACAGAATGT
CTGCGATCGC CGCTAGCAGC GACGGTGCAA GACCACTAG
 
Protein sequence
MSRSTLQPAR ISRVLPDSIA AEIGFEPGDA IISINGQQPR DLIDYQFLCS DEFLELEVLD 
AAGRSHQIEI EKDTDEGLGL EFETALFDGL IQCNNRCPFC FIDQQPPGKR ESLYYKDDDY
RLSFLYGSYL TLTNLSEAEW RRIAQLRLSP LYVSVHATEP DLRRRLLKNE RAGLIGEQLH
WFRQQQLQIH AQVVVCPDLN DGAQLQRTLM DLAEFHRGDP ATVASVAVVP VGLTRFRPTE
DELRPVQPAD AAATIALVEA LQTQFQTELG SRFAWLADEW YLIAGQPLPS ASWYEQYPQL
ENGVGSIRAF ISEFERQAAT LPSQIEPARR LTWVVGNVVE QAFQPLQARL NAVQGLQVDL
VGLASRYWGQ TLTVTGLLTG QDLIEALSDR DLGDGLLLPS VMLRHGDRCF LDDLTVAEVE
KALHTPIFVA EGITGLLTEC LRSPLAATVQ DH